This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1z4e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:02, 14 February 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1z4e.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of transcriptional regulator from Bacillus halodurans C-125==
-
|PDB= 1z4e |SIZE=350|CAPTION= <scene name='initialview01'>1z4e</scene>, resolution 2.00&Aring;
+
<StructureSection load='1z4e' size='340' side='right'caption='[[1z4e]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1z4e]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans_C-125 Alkalihalobacillus halodurans C-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z4E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z4E FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
|GENE=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z4e OCA], [https://pdbe.org/1z4e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z4e RCSB], [https://www.ebi.ac.uk/pdbsum/1z4e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z4e ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1z4e TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00583 Acetyltransf_1]</span>
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z4e OCA], [http://www.ebi.ac.uk/pdbsum/1z4e PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1z4e RCSB]</span>
+
[https://www.uniprot.org/uniprot/Q9KBG0_HALH5 Q9KBG0_HALH5]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal structure of transcriptional regulator from Bacillus halodurans C-125'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z4/1z4e_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
1Z4E is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z4E OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bacillus halodurans]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z4e ConSurf].
-
[[Category: Almo, S C.]]
+
<div style="clear:both"></div>
-
[[Category: Burley, S K.]]
+
__TOC__
-
[[Category: Fedorov, A A.]]
+
</StructureSection>
-
[[Category: Fedorov, E V.]]
+
[[Category: Alkalihalobacillus halodurans C-125]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: gnat fold]]
+
[[Category: Almo SC]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Burley SK]]
-
[[Category: nysgrc]]
+
[[Category: Fedorov AA]]
-
[[Category: nysgxrc target t2017]]
+
[[Category: Fedorov EV]]
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:28:55 2008''
+

Current revision

Crystal structure of transcriptional regulator from Bacillus halodurans C-125

PDB ID 1z4e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1z4e"
Personal tools