1z7a

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:44, 30 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1z7a.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of probable Polysaccharide deacetylase from Pseudomonas aeruginosa PAO1==
-
|PDB= 1z7a |SIZE=350|CAPTION= <scene name='initialview01'>1z7a</scene>, resolution 1.71&Aring;
+
<StructureSection load='1z7a' size='340' side='right'caption='[[1z7a]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[1z7a]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z7A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z7A FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.71&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IPA:ISOPROPYL+ALCOHOL'>IPA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01522 Polysacc_deac_1], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0726 CDA1]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z7a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z7a OCA], [https://pdbe.org/1z7a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z7a RCSB], [https://www.ebi.ac.uk/pdbsum/1z7a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z7a ProSAT], [https://www.topsan.org/Proteins/MCSG/1z7a TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z7a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z7a OCA], [http://www.ebi.ac.uk/pdbsum/1z7a PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1z7a RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q9I3J6_PSEAE Q9I3J6_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of probable Polysaccharide deacetylase from Pseudomonas aeruginosa PAO1'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z7/1z7a_consurf.spt"</scriptWhenChecked>
-
1Z7A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z7A OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Pseudomonas aeruginosa]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Chang, C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z7a ConSurf].
-
[[Category: Edwards, A M.]]
+
<div style="clear:both"></div>
-
[[Category: Joachimiak, A.]]
+
__TOC__
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</StructureSection>
-
[[Category: Savchenko, A.]]
+
[[Category: Large Structures]]
-
[[Category: Skarina, T.]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: hypothetical protein structural genomic]]
+
[[Category: Chang C]]
-
[[Category: mcsg]]
+
[[Category: Edwards AM]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: protein structure initiative]]
+
[[Category: Savchenko A]]
-
[[Category: psi]]
+
[[Category: Skarina T]]
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:31:06 2008''
+

Current revision

Crystal structure of probable Polysaccharide deacetylase from Pseudomonas aeruginosa PAO1

PDB ID 1z7a

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools