1z8m

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:37, 1 May 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1z8m.jpg|left|200px]]
 
-
{{Structure
+
==Solution structure of the conserved hypothtical protein HP0894 from Helicobacter pylori==
-
|PDB= 1z8m |SIZE=350|CAPTION= <scene name='initialview01'>1z8m</scene>
+
<StructureSection load='1z8m' size='340' side='right'caption='[[1z8m]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[1z8m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z8M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z8M FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
|GENE= HP0894 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85962 Helicobacter pylori 26695])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z8m OCA], [https://pdbe.org/1z8m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z8m RCSB], [https://www.ebi.ac.uk/pdbsum/1z8m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z8m ProSAT]</span></td></tr>
-
|DOMAIN=
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1z8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z8m OCA], [http://www.ebi.ac.uk/pdbsum/1z8m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1z8m RCSB]</span>
+
[https://www.uniprot.org/uniprot/O25554_HELPY O25554_HELPY]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Solution structure of the conserved hypothtical protein HP0894 from Helicobacter pylori'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z8/1z8m_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
1Z8M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z8M OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==Reference==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z8m ConSurf].
-
Solution structure of conserved hypothetical protein HP0894 from Helicobacter pylori., Han KD, Park SJ, Jang SB, Son WS, Lee BJ, Proteins. 2005 Dec 1;61(4):1114-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16231332 16231332]
+
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Helicobacter pylori 26695]]
[[Category: Helicobacter pylori 26695]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Han, K D.]]
+
[[Category: Han KD]]
-
[[Category: Jang, S B.]]
+
[[Category: Jang SB]]
-
[[Category: Lee, B J.]]
+
[[Category: Lee BJ]]
-
[[Category: Park, S J.]]
+
[[Category: Park SJ]]
-
[[Category: helicobacter pylori]]
+
-
[[Category: hp0894]]
+
-
[[Category: hypothetical protein]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:32:09 2008''
+

Current revision

Solution structure of the conserved hypothtical protein HP0894 from Helicobacter pylori

PDB ID 1z8m

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools