2gta

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==Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.==
==Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.==
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<StructureSection load='2gta' size='340' side='right' caption='[[2gta]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
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<StructureSection load='2gta' size='340' side='right'caption='[[2gta]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2gta]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GTA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GTA FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2gta]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GTA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GTA FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ypjD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gta OCA], [https://pdbe.org/2gta PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gta RCSB], [https://www.ebi.ac.uk/pdbsum/2gta PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gta ProSAT], [https://www.topsan.org/Proteins/NESGC/2gta TOPSAN]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gta FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gta OCA], [http://pdbe.org/2gta PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2gta RCSB], [http://www.ebi.ac.uk/pdbsum/2gta PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2gta ProSAT], [http://www.topsan.org/Proteins/NESGC/2gta TOPSAN]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/YPJD_BACSU YPJD_BACSU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/2gta_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gt/2gta_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacillus globigii migula 1900]]
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[[Category: Bacillus subtilis]]
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[[Category: Acton, T]]
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[[Category: Large Structures]]
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[[Category: Hunt, J F]]
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[[Category: Acton T]]
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[[Category: Ma, L C]]
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[[Category: Hunt JF]]
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[[Category: Montelione, G T]]
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[[Category: Ma LC]]
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[[Category: Structural genomic]]
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[[Category: Montelione GT]]
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[[Category: Seetharaman, J]]
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[[Category: Seetharaman J]]
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[[Category: Tong, L]]
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[[Category: Tong L]]
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[[Category: Vorobiev, S M]]
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[[Category: Vorobiev SM]]
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[[Category: Wang, D]]
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[[Category: Wang D]]
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[[Category: Xio, R]]
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[[Category: Xio R]]
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[[Category: Zhou, W]]
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[[Category: Zhou W]]
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[[Category: Nesg]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Pyrophosphatase]]
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[[Category: Unknown function]]
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[[Category: Ypjd]]
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Current revision

Crystal Structure of the putative pyrophosphatase YPJD from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR428.

PDB ID 2gta

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OCA

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