2qsr
From Proteopedia
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==Crystal structure of C-terminal domain of transcription-repair coupling factor== | ==Crystal structure of C-terminal domain of transcription-repair coupling factor== | ||
| - | <StructureSection load='2qsr' size='340' side='right' caption='[[2qsr]], [[Resolution|resolution]] 3.10Å' scene=''> | + | <StructureSection load='2qsr' size='340' side='right'caption='[[2qsr]], [[Resolution|resolution]] 3.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QSR FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qsr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qsr OCA], [https://pdbe.org/2qsr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qsr RCSB], [https://www.ebi.ac.uk/pdbsum/2qsr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qsr ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qsr TOPSAN]</span></td></tr> |
</table> | </table> | ||
| - | == Function == | ||
| - | [[http://www.uniprot.org/uniprot/Q8DRQ1_STRR6 Q8DRQ1_STRR6]] Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (By similarity).[HAMAP-Rule:MF_00969] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qs/2qsr_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qs/2qsr_consurf.spt"</scriptWhenChecked> |
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qsr ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qsr ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
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| + | ==See Also== | ||
| + | *[[Transcription-repair coupling factor 3D structures|Transcription-repair coupling factor 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Almo | + | [[Category: Almo SC]] |
| - | [[Category: Bain | + | [[Category: Bain K]] |
| - | [[Category: Burley | + | [[Category: Burley SK]] |
| - | [[Category: Gilmore | + | [[Category: Gilmore M]] |
| - | [[Category: Iizuka | + | [[Category: Iizuka M]] |
| - | + | [[Category: Ramagopal UA]] | |
| - | [[Category: Ramagopal | + | [[Category: Rodgers L]] |
| - | [[Category: Rodgers | + | [[Category: Sauder JM]] |
| - | [[Category: Sauder | + | [[Category: Toro R]] |
| - | [[Category: Toro | + | [[Category: Wasserman S]] |
| - | [[Category: Wasserman | + | |
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Current revision
Crystal structure of C-terminal domain of transcription-repair coupling factor
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Categories: Large Structures | Almo SC | Bain K | Burley SK | Gilmore M | Iizuka M | Ramagopal UA | Rodgers L | Sauder JM | Toro R | Wasserman S
