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1zcc

From Proteopedia

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[[Image:1zcc.gif|left|200px]]
 
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{{Structure
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==Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58==
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|PDB= 1zcc |SIZE=350|CAPTION= <scene name='initialview01'>1zcc</scene>, resolution 2.50&Aring;
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<StructureSection load='1zcc' size='340' side='right'caption='[[1zcc]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
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<table><tr><td colspan='2'>[[1zcc]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZCC FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam03009 GDPD], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0584 UgpQ]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zcc OCA], [https://pdbe.org/1zcc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zcc RCSB], [https://www.ebi.ac.uk/pdbsum/1zcc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zcc ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1zcc TOPSAN]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zcc OCA], [http://www.ebi.ac.uk/pdbsum/1zcc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zcc RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/A9CG82_AGRFC A9CG82_AGRFC]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zc/1zcc_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zcc ConSurf].
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<div style="clear:both"></div>
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'''Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58'''
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==See Also==
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*[[Phosphodiesterase 3D structures|Phosphodiesterase 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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1ZCC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZCC OCA].
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[[Category: Agrobacterium fabrum str. C58]]
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[[Category: Large Structures]]
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==Reference==
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[[Category: Burley SK]]
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Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens by SAD with a large asymmetric unit., Rao KN, Bonanno JB, Burley SK, Swaminathan S, Proteins. 2006 Nov 1;65(2):514-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16909422 16909422]
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[[Category: Krishnamurthy NR]]
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[[Category: Agrobacterium tumefaciens]]
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[[Category: Kumaran D]]
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[[Category: Single protein]]
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[[Category: Swaminathan S]]
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[[Category: Burley, S K.]]
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[[Category: Krishnamurthy, N R.]]
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[[Category: Kumaran, D.]]
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[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
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[[Category: Swaminathan, S.]]
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[[Category: agrobacterium tumefaciens str. c58]]
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[[Category: glycerophosphodiester phosphodiesterase]]
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[[Category: new york structural genomix research consortium]]
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[[Category: nysgxrc]]
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: structural genomic]]
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[[Category: t2047]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:33:55 2008''
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Current revision

Crystal structure of glycerophosphodiester phosphodiesterase from Agrobacterium tumefaciens str.C58

PDB ID 1zcc

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