This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3tlx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:09, 1 March 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal Structure of PF10_0086, adenylate kinase from plasmodium falciparum==
==Crystal Structure of PF10_0086, adenylate kinase from plasmodium falciparum==
-
<StructureSection load='3tlx' size='340' side='right' caption='[[3tlx]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
+
<StructureSection load='3tlx' size='340' side='right'caption='[[3tlx]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3tlx]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TLX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3TLX FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3tlx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TLX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TLX FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Adenylate_kinase Adenylate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.4.3 2.7.4.3] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3tlx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tlx OCA], [http://pdbe.org/3tlx PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3tlx RCSB], [http://www.ebi.ac.uk/pdbsum/3tlx PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3tlx ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tlx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tlx OCA], [https://pdbe.org/3tlx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tlx RCSB], [https://www.ebi.ac.uk/pdbsum/3tlx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tlx ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/KAD1_PLAF7 KAD1_PLAF7] Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP (PubMed:15478799). Has very low activity with CTP, GTP, ITP and UTP and no activity with GMP, CMP, UMP or IMP in vitro (PubMed:15478799).<ref>PMID:15478799</ref>
 +
 +
==See Also==
 +
*[[Adenylate kinase 3D structures|Adenylate kinase 3D structures]]
 +
== References ==
 +
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Adenylate kinase]]
+
[[Category: Large Structures]]
[[Category: Plasmodium falciparum]]
[[Category: Plasmodium falciparum]]
-
[[Category: Amani, M]]
+
[[Category: Amani M]]
-
[[Category: Arrowsmith, C H]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Bountra, C]]
+
[[Category: Bountra C]]
-
[[Category: Crombet, L]]
+
[[Category: Crombet L]]
-
[[Category: Edwards, A M]]
+
[[Category: Edwards AM]]
-
[[Category: Hui, R]]
+
[[Category: Hui R]]
-
[[Category: Loppnau, P]]
+
[[Category: Loppnau P]]
-
[[Category: Park, H]]
+
[[Category: Park H]]
-
[[Category: Perieteanu, A]]
+
[[Category: Perieteanu A]]
-
[[Category: Structural genomic]]
+
[[Category: Weadge J]]
-
[[Category: Weadge, J]]
+
[[Category: Wernimont AK]]
-
[[Category: Wernimont, A K]]
+
-
[[Category: Atp binding]]
+
-
[[Category: Phosphorylation]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Sgc]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal Structure of PF10_0086, adenylate kinase from plasmodium falciparum

PDB ID 3tlx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3tlx"
Personal tools