3fi8
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
==Crystal structure of choline kinase from Plasmodium Falciparum, PF14_0020== | ==Crystal structure of choline kinase from Plasmodium Falciparum, PF14_0020== | ||
| - | <StructureSection load='3fi8' size='340' side='right' caption='[[3fi8]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='3fi8' size='340' side='right'caption='[[3fi8]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3fi8]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3fi8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FI8 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OPE:PHOSPHORIC+ACID+MONO-(2-AMINO-ETHYL)+ESTER'>OPE</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OPE:PHOSPHORIC+ACID+MONO-(2-AMINO-ETHYL)+ESTER'>OPE</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fi8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fi8 OCA], [https://pdbe.org/3fi8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fi8 RCSB], [https://www.ebi.ac.uk/pdbsum/3fi8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fi8 ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q8IM71_PLAF7 Q8IM71_PLAF7] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/3fi8_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/3fi8_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 18: | Line 20: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fi8 ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fi8 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Choline kinase 3D structures|Choline kinase 3D structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Amaya | + | [[Category: Plasmodium falciparum 3D7]] |
| - | [[Category: Arrowsmith | + | [[Category: Amaya MF]] |
| - | [[Category: Artz | + | [[Category: Arrowsmith CH]] |
| - | [[Category: Bochkarev | + | [[Category: Artz JD]] |
| - | [[Category: Bountra | + | [[Category: Bochkarev A]] |
| - | [[Category: Cossar | + | [[Category: Bountra C]] |
| - | [[Category: Edwards | + | [[Category: Cossar D]] |
| - | [[Category: Hills | + | [[Category: Edwards AM]] |
| - | [[Category: Hui | + | [[Category: Hills T]] |
| - | [[Category: Kozieradzki | + | [[Category: Hui R]] |
| - | [[Category: Lew | + | [[Category: Kozieradzki I]] |
| - | [[Category: Pizarro | + | [[Category: Lew J]] |
| - | + | [[Category: Pizarro JC]] | |
| - | [[Category: Schapira | + | [[Category: Schapira M]] |
| - | [[Category: Senesterra | + | [[Category: Senesterra G]] |
| - | [[Category: Vedadi | + | [[Category: Vedadi M]] |
| - | [[Category: Wasney | + | [[Category: Wasney G]] |
| - | [[Category: Weigelt | + | [[Category: Weigelt J]] |
| - | [[Category: Wernimont | + | [[Category: Wernimont AK]] |
| - | [[Category: Xiao | + | [[Category: Xiao T]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal structure of choline kinase from Plasmodium Falciparum, PF14_0020
| |||||||||||
Categories: Large Structures | Plasmodium falciparum 3D7 | Amaya MF | Arrowsmith CH | Artz JD | Bochkarev A | Bountra C | Cossar D | Edwards AM | Hills T | Hui R | Kozieradzki I | Lew J | Pizarro JC | Schapira M | Senesterra G | Vedadi M | Wasney G | Weigelt J | Wernimont AK | Xiao T
