3fk6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:30, 1 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of TetR triple mutant (H64K, S135L, S138I)==
==Crystal structure of TetR triple mutant (H64K, S135L, S138I)==
-
<StructureSection load='3fk6' size='340' side='right' caption='[[3fk6]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='3fk6' size='340' side='right'caption='[[3fk6]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3fk6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FK6 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FK6 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3fk6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FK6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FK6 FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vke|2vke]], [[2o7o|2o7o]], [[2vkv|2vkv]], [[2tct|2tct]], [[3fk7|3fk7]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tetR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fk6 OCA], [https://pdbe.org/3fk6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fk6 RCSB], [https://www.ebi.ac.uk/pdbsum/3fk6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fk6 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fk6 OCA], [http://pdbe.org/3fk6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3fk6 RCSB], [http://www.ebi.ac.uk/pdbsum/3fk6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3fk6 ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TETR2_ECOLX TETR2_ECOLX]] TetR is the repressor of the tetracycline resistance element; its N-terminal region forms a helix-turn-helix structure and binds DNA. Binding of tetracycline to TetR reduces the repressor affinity for the tetracycline resistance gene (tetA) promoter operator sites.
+
[https://www.uniprot.org/uniprot/TETR4_ECOLX TETR4_ECOLX] TetR is the repressor of the tetracycline resistance element; its N-terminal region forms a helix-turn-helix structure and binds DNA. Binding of tetracycline to TetR reduces the repressor affinity for the tetracycline resistance gene (tetA) promoter operator sites.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/3fk6_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/3fk6_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 29: Line 28:
</div>
</div>
<div class="pdbe-citations 3fk6" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3fk6" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Tetracycline repressor protein 3D structures|Tetracycline repressor protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacillus coli migula 1895]]
+
[[Category: Escherichia coli]]
-
[[Category: Gmeiner, P]]
+
[[Category: Large Structures]]
-
[[Category: Hillen, W]]
+
[[Category: Gmeiner P]]
-
[[Category: Klieber, M A]]
+
[[Category: Hillen W]]
-
[[Category: Lochner, S]]
+
[[Category: Klieber MA]]
-
[[Category: Muller, Y A]]
+
[[Category: Lochner S]]
-
[[Category: Scholz, O]]
+
[[Category: Muller YA]]
-
[[Category: 4-de-dimethylamino-anhydrotetracycline]]
+
[[Category: Scholz O]]
-
[[Category: Altered inducer specificity]]
+
-
[[Category: Antibiotic resistance]]
+
-
[[Category: Bacterial transcription regulation]]
+
-
[[Category: Dna-binding]]
+
-
[[Category: Magnesium]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Repressor]]
+
-
[[Category: Tetracycline repressor]]
+
-
[[Category: Transcription]]
+
-
[[Category: Transcription regulation]]
+
-
[[Category: Transposable element]]
+

Current revision

Crystal structure of TetR triple mutant (H64K, S135L, S138I)

PDB ID 3fk6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools