1zod

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[[Image:1zod.gif|left|200px]]
 
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{{Structure
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==Crystal structure of dialkylglycine decarboxylase bound with cesium ion==
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|PDB= 1zod |SIZE=350|CAPTION= <scene name='initialview01'>1zod</scene>, resolution 1.80&Aring;
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<StructureSection load='1zod' size='340' side='right'caption='[[1zod]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5&#39;-PHOSPHATE'>PLP</scene>
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<table><tr><td colspan='2'>[[1zod]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Burkholderia_cepacia Burkholderia cepacia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZOD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZOD FirstGlance]. <br>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/2,2-dialkylglycine_decarboxylase_(pyruvate) 2,2-dialkylglycine decarboxylase (pyruvate)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.64 4.1.1.64] </span>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zod OCA], [https://pdbe.org/1zod PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zod RCSB], [https://www.ebi.ac.uk/pdbsum/1zod PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zod ProSAT]</span></td></tr>
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|RELATEDENTRY=[[1dka|1DKA]], [[2dkb|2DKB]], [[1zob|1ZOB]]
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zod FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zod OCA], [http://www.ebi.ac.uk/pdbsum/1zod PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zod RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/DGDA_BURCE DGDA_BURCE] The dialkylglycine decarboxylase is of interest because it normally catalyzes both decarboxylation and amino transfer. It may be more properly described as a decarboxylating aminotransferase rather than an aminotransferring decarboxylase.
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== Evolutionary Conservation ==
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'''Crystal structure of dialkylglycine decarboxylase bound with cesium ion'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zo/1zod_consurf.spt"</scriptWhenChecked>
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1ZOD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Burkholderia_cepacia Burkholderia cepacia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZOD OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: 2,2-dialkylglycine decarboxylase (pyruvate)]]
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zod ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Burkholderia cepacia]]
[[Category: Burkholderia cepacia]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Liu, W.]]
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[[Category: Liu W]]
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[[Category: Toney, M D.]]
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[[Category: Toney MD]]
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[[Category: cesium]]
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[[Category: decarboxylase]]
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[[Category: pyridoxal]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:39:33 2008''
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Current revision

Crystal structure of dialkylglycine decarboxylase bound with cesium ion

PDB ID 1zod

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