1zp6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:04, 17 October 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1zp6.gif|left|200px]]
 
-
{{Structure
+
==Crystal Structure of Atu3015, a Putative Cytidylate Kinase from Agrobacterium tumefaciens, Northeast Structural Genomics Target AtR62==
-
|PDB= 1zp6 |SIZE=350|CAPTION= <scene name='initialview01'>1zp6</scene>, resolution 3.20&Aring;
+
<StructureSection load='1zp6' size='340' side='right'caption='[[1zp6]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
<table><tr><td colspan='2'>[[1zp6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZP6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZP6 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0645 COG0645]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zp6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zp6 OCA], [https://pdbe.org/1zp6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zp6 RCSB], [https://www.ebi.ac.uk/pdbsum/1zp6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zp6 ProSAT], [https://www.topsan.org/Proteins/NESGC/1zp6 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zp6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zp6 OCA], [http://www.ebi.ac.uk/pdbsum/1zp6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zp6 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/A9CEJ3_AGRFC A9CEJ3_AGRFC]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal Structure of Atu3015, a Putative Cytidylate Kinase from Agrobacterium tumefaciens, Northeast Structural Genomics Target AtR62'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zp/1zp6_consurf.spt"</scriptWhenChecked>
-
1ZP6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZP6 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Agrobacterium tumefaciens]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Abashidze, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zp6 ConSurf].
-
[[Category: Acton, T B.]]
+
<div style="clear:both"></div>
-
[[Category: Conover, K.]]
+
__TOC__
-
[[Category: Forouhar, F.]]
+
</StructureSection>
-
[[Category: Hunt, J F.]]
+
[[Category: Agrobacterium fabrum str. C58]]
-
[[Category: Kuzin, A.]]
+
[[Category: Large Structures]]
-
[[Category: Montelione, G T.]]
+
[[Category: Abashidze M]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Acton TB]]
-
[[Category: Tong, L.]]
+
[[Category: Conover K]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Forouhar F]]
-
[[Category: alpha-beta protein.]]
+
[[Category: Hunt JF]]
-
[[Category: nesg]]
+
[[Category: Kuzin A]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Montelione GT]]
-
[[Category: protein structure initiative]]
+
[[Category: Tong L]]
-
[[Category: psi]]
+
[[Category: Vorobiev SM]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:39:48 2008''
+

Current revision

Crystal Structure of Atu3015, a Putative Cytidylate Kinase from Agrobacterium tumefaciens, Northeast Structural Genomics Target AtR62

PDB ID 1zp6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools