3l8w

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (16:21, 1 November 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Urate oxidase from aspergillus flavus complexed with xanthin==
==Urate oxidase from aspergillus flavus complexed with xanthin==
-
<StructureSection load='3l8w' size='340' side='right' caption='[[3l8w]], [[Resolution|resolution]] 1.00&Aring;' scene=''>
+
<StructureSection load='3l8w' size='340' side='right'caption='[[3l8w]], [[Resolution|resolution]] 1.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3l8w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspfl Aspfl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L8W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3L8W FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3l8w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_flavus Aspergillus flavus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L8W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3L8W FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4PO:ALPHA-(4-PYRIDYL-1-OXIDE)-N-TERT-BUTYLNITRONE'>4PO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=XAN:XANTHINE'>XAN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4PO:ALPHA-(4-PYRIDYL-1-OXIDE)-N-TERT-BUTYLNITRONE'>4PO</scene>, <scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=XAN:XANTHINE'>XAN</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1r51|1r51]], [[1r4s|1r4s]], [[1r4u|1r4u]], [[1r56|1r56]], [[1wrr|1wrr]], [[1xt4|1xt4]], [[3l9g|3l9g]], [[3lbg|3lbg]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3l8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l8w OCA], [https://pdbe.org/3l8w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3l8w RCSB], [https://www.ebi.ac.uk/pdbsum/3l8w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3l8w ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Factor_independent_urate_hydroxylase Factor independent urate hydroxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.3.3 1.7.3.3] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3l8w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l8w OCA], [http://pdbe.org/3l8w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3l8w RCSB], [http://www.ebi.ac.uk/pdbsum/3l8w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3l8w ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/URIC_ASPFL URIC_ASPFL]] Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
+
[https://www.uniprot.org/uniprot/URIC_ASPFL URIC_ASPFL] Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l8/3l8w_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l8/3l8w_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 31: Line 29:
</div>
</div>
<div class="pdbe-citations 3l8w" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3l8w" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Urate oxidase 3D structures|Urate oxidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aspfl]]
+
[[Category: Aspergillus flavus]]
-
[[Category: Factor independent urate hydroxylase]]
+
[[Category: Large Structures]]
-
[[Category: Chiadmi, M]]
+
[[Category: Chiadmi M]]
-
[[Category: Gabison, L]]
+
[[Category: Colloc'h N]]
-
[[Category: H, N Colloc]]
+
[[Category: Gabison L]]
-
[[Category: Prange, T]]
+
[[Category: Prange T]]
-
[[Category: Inhibition aspergillus flavus]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Peroxisome]]
+
-
[[Category: Purine metabolism]]
+
-
[[Category: Uric acid degradation]]
+
-
[[Category: Xanthine]]
+

Current revision

Urate oxidase from aspergillus flavus complexed with xanthin

PDB ID 3l8w

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3l8w"
Personal tools