1zsl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:58, 6 November 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1zsl.gif|left|200px]]
 
-
{{Structure
+
==Factor XI complexed with a pyrimidinone inhibitor==
-
|PDB= 1zsl |SIZE=350|CAPTION= <scene name='initialview01'>1zsl</scene>, resolution 2.05&Aring;
+
<StructureSection load='1zsl' size='340' side='right'caption='[[1zsl]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=624:2-(2-(3,4-DICHLOROPHENYL)-5-(ISOPROPYLAMINO)-6-OXOPYRIMIDIN-1(6H)-YL)-N-((S)-1-OXO-1-(THIAZOL-2-YL)-5-GUANIDINOPENTAN-2-YL)ACETAMIDE'>624</scene>
+
<table><tr><td colspan='2'>[[1zsl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZSL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZSL FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Coagulation_factor_XIa Coagulation factor XIa], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.27 3.4.21.27] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
|GENE= F11 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=624:2-(2-(3,4-DICHLOROPHENYL)-5-(ISOPROPYLAMINO)-6-OXOPYRIMIDIN-1(6H)-YL)-N-((S)-1-OXO-1-(THIAZOL-2-YL)-5-GUANIDINOPENTAN-2-YL)ACETAMIDE'>624</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zsl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zsl OCA], [https://pdbe.org/1zsl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zsl RCSB], [https://www.ebi.ac.uk/pdbsum/1zsl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zsl ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[1zhr|1ZHR]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1zsl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zsl OCA], [http://www.ebi.ac.uk/pdbsum/1zsl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1zsl RCSB]</span>
+
== Disease ==
-
}}
+
[https://www.uniprot.org/uniprot/FA11_HUMAN FA11_HUMAN] Defects in F11 are the cause of factor XI deficiency (FA11D) [MIM:[https://omim.org/entry/612416 612416]; also known as plasma thromboplastin antecedent deficiency or Rosenthal syndrome. It is a hemorrhagic disease characterized by reduced levels and activity of factor XI resulting in moderate bleeding symptoms, usually occurring after trauma or surgery. Patients usually do not present spontaneous bleeding but women can present with menorrhagia. Hemorrhages are usually moderate.<ref>PMID:2813350</ref> <ref>PMID:1547342</ref> <ref>PMID:7888672</ref> <ref>PMID:7669672</ref> <ref>PMID:9401068</ref> <ref>PMID:9787168</ref> <ref>PMID:10027710</ref> <ref>PMID:10606881</ref> <ref>PMID:11895778</ref> <ref>PMID:15026311</ref> <ref>PMID:15180874</ref> <ref>PMID:15953011</ref> <ref>PMID:16607084</ref> <ref>PMID:18005151</ref> <ref>PMID:21668437</ref> <ref>PMID:21457405</ref> <ref>PMID:22016685</ref> <ref>PMID:22322133</ref> <ref>PMID:21999818</ref> <ref>PMID:22159456</ref>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/FA11_HUMAN FA11_HUMAN] Factor XI triggers the middle phase of the intrinsic pathway of blood coagulation by activating factor IX.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zs/1zsl_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zsl ConSurf].
 +
<div style="clear:both"></div>
-
'''Factor XI complexed with a pyrimidinone inhibitor'''
+
==See Also==
-
 
+
*[[Factor XIa 3D structures|Factor XIa 3D structures]]
-
 
+
== References ==
-
==Disease==
+
<references/>
-
Known disease associated with this structure: Factor XI deficiency, autosomal dominant OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=264900 264900]], Factor XI deficiency, autosomal recessive OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=264900 264900]]
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
1ZSL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZSL OCA].
+
-
[[Category: Coagulation factor XIa]]
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Abdel-Meguid, S.]]
+
[[Category: Abdel-Meguid S]]
-
[[Category: Babine, R.]]
+
[[Category: Babine R]]
-
[[Category: Bibbins, F.]]
+
[[Category: Bibbins F]]
-
[[Category: L., Jin.]]
+
[[Category: Jin L]]
-
[[Category: Meyers, H.]]
+
[[Category: Meyers H]]
-
[[Category: Nagafuji, P.]]
+
[[Category: Nagafuji P]]
-
[[Category: Quinn, J.]]
+
[[Category: Quinn J]]
-
[[Category: Rynkiewicz, M.]]
+
[[Category: Rynkiewicz M]]
-
[[Category: Strickler, J.]]
+
[[Category: Strickler J]]
-
[[Category: coagulation]]
+
-
[[Category: covalent complex]]
+
-
[[Category: serine protease]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:41:08 2008''
+

Current revision

Factor XI complexed with a pyrimidinone inhibitor

PDB ID 1zsl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1zsl"
Personal tools