This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4zlt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:20, 27 September 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of viral chemokine binding protein R17 in complex with CCL3==
==Crystal structure of viral chemokine binding protein R17 in complex with CCL3==
-
<StructureSection load='4zlt' size='340' side='right' caption='[[4zlt]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
+
<StructureSection load='4zlt' size='340' side='right'caption='[[4zlt]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4zlt]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Cricetid_gammaherpesvirus_2 Cricetid gammaherpesvirus 2] and [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZLT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ZLT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4zlt]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Cricetid_gammaherpesvirus_2 Cricetid gammaherpesvirus 2] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ZLT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ZLT FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4zkq|4zkq]], [[2x6g|2x6g]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHVP-L.R17, RHVP.R17 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1605972 Cricetid gammaherpesvirus 2]), Ccl3, Mip1a, Scya3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4zlt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zlt OCA], [https://pdbe.org/4zlt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4zlt RCSB], [https://www.ebi.ac.uk/pdbsum/4zlt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4zlt ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4zlt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4zlt OCA], [http://pdbe.org/4zlt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4zlt RCSB], [http://www.ebi.ac.uk/pdbsum/4zlt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4zlt ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CCL3_MOUSE CCL3_MOUSE]] Monokine with inflammatory, pyrogenic and chemokinetic properties. Has a potent chemotactic activity for eosinophils. Binding to a high-affinity receptor activates calcium release in neutrophils.
+
[https://www.uniprot.org/uniprot/E9M5R0_9GAMA E9M5R0_9GAMA]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 24:
</StructureSection>
</StructureSection>
[[Category: Cricetid gammaherpesvirus 2]]
[[Category: Cricetid gammaherpesvirus 2]]
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Large Structures]]
-
[[Category: Fremont, D H]]
+
[[Category: Mus musculus]]
-
[[Category: Lubman, O Y]]
+
[[Category: Fremont DH]]
-
[[Category: Chemokine binding protein-chemokine complex]]
+
[[Category: Lubman OY]]
-
[[Category: Rhvp chemokine binding protein in complex with chemokine ccl3]]
+

Current revision

Crystal structure of viral chemokine binding protein R17 in complex with CCL3

PDB ID 4zlt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4zlt"
Personal tools