5cbh
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==Structural and Functional Characterization of a Calcium-activated Cation channel from Tsukamurella Paurometabola== | ==Structural and Functional Characterization of a Calcium-activated Cation channel from Tsukamurella Paurometabola== | ||
- | <StructureSection load='5cbh' size='340' side='right' caption='[[5cbh]], [[Resolution|resolution]] 3.37Å' scene=''> | + | <StructureSection load='5cbh' size='340' side='right'caption='[[5cbh]], [[Resolution|resolution]] 3.37Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[5cbh]] is a 6 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5cbh]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Tsukamurella_paurometabola_DSM_20162 Tsukamurella paurometabola DSM 20162]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CBH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CBH FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.37Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | |
- | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5cbh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5cbh OCA], [https://pdbe.org/5cbh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5cbh RCSB], [https://www.ebi.ac.uk/pdbsum/5cbh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5cbh ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/D5UM26_TSUPD D5UM26_TSUPD] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The selectivity filter is an essential functional element of K(+) channels that is highly conserved both in terms of its primary sequence and its three-dimensional structure. Here, we investigate the properties of an ion channel from the Gram-positive bacterium Tsukamurella paurometabola with a selectivity filter formed by an uncommon proline-rich sequence. Electrophysiological recordings show that it is a non-selective cation channel and that its activity depends on Ca(2+) concentration. In the crystal structure, the selectivity filter adopts a novel conformation with Ca(2+) ions bound within the filter near the pore helix where they are coordinated by backbone oxygen atoms, a recurrent motif found in multiple proteins. The binding of Ca(2+) ion in the selectivity filter controls the widening of the pore as shown in crystal structures and in molecular dynamics simulations. The structural, functional and computational data provide a characterization of this calcium-gated cationic channel. | ||
+ | |||
+ | Structural and functional characterization of a calcium-activated cation channel from Tsukamurella paurometabola.,Dhakshnamoorthy B, Rohaim A, Rui H, Blachowicz L, Roux B Nat Commun. 2016 Sep 28;7:12753. doi: 10.1038/ncomms12753. PMID:27678077<ref>PMID:27678077</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 5cbh" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Tsukamurella paurometabola DSM 20162]] |
- | [[Category: | + | [[Category: Blachowicz L]] |
- | [[Category: | + | [[Category: Dhakshnamoorthy B]] |
- | [[Category: | + | [[Category: Rohaim A]] |
- | [[Category: | + | [[Category: Roux B]] |
- | [[Category: | + | [[Category: Rui H]] |
- | + | ||
- | + |
Current revision
Structural and Functional Characterization of a Calcium-activated Cation channel from Tsukamurella Paurometabola
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