This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5h6b

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:24, 9 August 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of a thermostable lipase from Marine Streptomyces==
==Crystal structure of a thermostable lipase from Marine Streptomyces==
-
<StructureSection load='5h6b' size='340' side='right' caption='[[5h6b]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
+
<StructureSection load='5h6b' size='340' side='right'caption='[[5h6b]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5h6b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_sp._w007 Streptomyces sp. w007]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5H6B FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5h6b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_sp._W007 Streptomyces sp. W007]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5H6B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5H6B FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5h6g|5h6g]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPW_1544 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1055352 Streptomyces sp. W007])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5h6b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6b OCA], [https://pdbe.org/5h6b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5h6b RCSB], [https://www.ebi.ac.uk/pdbsum/5h6b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6b ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Triacylglycerol_lipase Triacylglycerol lipase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.3 3.1.1.3] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5h6b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5h6b OCA], [http://pdbe.org/5h6b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5h6b RCSB], [http://www.ebi.ac.uk/pdbsum/5h6b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5h6b ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/H0B8D4_9ACTN H0B8D4_9ACTN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Streptomyces sp. w007]]
+
[[Category: Large Structures]]
-
[[Category: Triacylglycerol lipase]]
+
[[Category: Streptomyces sp. W007]]
-
[[Category: Hou, S]]
+
[[Category: Hou S]]
-
[[Category: Liu, J]]
+
[[Category: Liu J]]
-
[[Category: Zhao, Z]]
+
[[Category: Zhao Z]]
-
[[Category: Hydrolase]]
+
-
[[Category: Lipase]]
+
-
[[Category: Marine]]
+
-
[[Category: Thermostability]]
+

Current revision

Crystal structure of a thermostable lipase from Marine Streptomyces

PDB ID 5h6b

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5h6b"
Personal tools