This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5ngg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:55, 15 November 2023) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of the subclass B3 metallo-beta-lactamase BJP-1 in complex with acetate anion==
==Crystal structure of the subclass B3 metallo-beta-lactamase BJP-1 in complex with acetate anion==
-
<StructureSection load='5ngg' size='340' side='right' caption='[[5ngg]], [[Resolution|resolution]] 1.18&Aring;' scene=''>
+
<StructureSection load='5ngg' size='340' side='right'caption='[[5ngg]], [[Resolution|resolution]] 1.18&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5ngg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bradu Bradu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NGG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5NGG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5ngg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bradyrhizobium_diazoefficiens_USDA_110 Bradyrhizobium diazoefficiens USDA 110]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NGG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NGG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.18&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">blr6230 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224911 BRADU])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ngg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ngg OCA], [http://pdbe.org/5ngg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5ngg RCSB], [http://www.ebi.ac.uk/pdbsum/5ngg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5ngg ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ngg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ngg OCA], [https://pdbe.org/5ngg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ngg RCSB], [https://www.ebi.ac.uk/pdbsum/5ngg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ngg ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q89GW5_BRADU Q89GW5_BRADU]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bradu]]
+
[[Category: Bradyrhizobium diazoefficiens USDA 110]]
-
[[Category: Benvenuti, M]]
+
[[Category: Large Structures]]
-
[[Category: Mangani, S]]
+
[[Category: Benvenuti M]]
-
[[Category: Pisa, F Di]]
+
[[Category: Di Pisa F]]
-
[[Category: Pozzi, C]]
+
[[Category: Mangani S]]
-
[[Category: B3 acetate]]
+
[[Category: Pozzi C]]
-
[[Category: Bjp-1]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Metallo-beta-lactamase]]
+

Current revision

Crystal structure of the subclass B3 metallo-beta-lactamase BJP-1 in complex with acetate anion

PDB ID 5ngg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools