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5chz
From Proteopedia
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==Structure of wild-type human MBD4 bound to a G:T mismatch== | ==Structure of wild-type human MBD4 bound to a G:T mismatch== | ||
| - | <StructureSection load='5chz' size='340' side='right' caption='[[5chz]], [[Resolution|resolution]] 1.83Å' scene=''> | + | <StructureSection load='5chz' size='340' side='right'caption='[[5chz]], [[Resolution|resolution]] 1.83Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5chz]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5chz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5CHZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5CHZ FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5chz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5chz OCA], [https://pdbe.org/5chz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5chz RCSB], [https://www.ebi.ac.uk/pdbsum/5chz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5chz ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/MBD4_HUMAN MBD4_HUMAN] Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein.<ref>PMID:10097147</ref> <ref>PMID:10930409</ref> |
| + | |||
| + | ==See Also== | ||
| + | *[[Methyl CpG binding protein 3D structures|Methyl CpG binding protein 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Synthetic construct]] |
| - | [[Category: | + | [[Category: Lee S]] |
| - | [[Category: | + | [[Category: Lin Y-L]] |
| - | [[Category: | + | [[Category: Ouzon-Shubeita H]] |
| - | + | ||
| - | + | ||
Current revision
Structure of wild-type human MBD4 bound to a G:T mismatch
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