This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5tk6
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
==Structure of the HD-domain phosphohydrolase OxsA with Oxetanocin-A diphosphate bound== | ==Structure of the HD-domain phosphohydrolase OxsA with Oxetanocin-A diphosphate bound== | ||
| - | <StructureSection load='5tk6' size='340' side='right' caption='[[5tk6]], [[Resolution|resolution]] 1.92Å' scene=''> | + | <StructureSection load='5tk6' size='340' side='right'caption='[[5tk6]], [[Resolution|resolution]] 1.92Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5tk6]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5tk6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Priestia_megaterium Priestia megaterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5TK6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5TK6 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=7D3:[(2S,3R,4R)-4-(6-AMINO-9H-PURIN-9-YL)-3-(HYDROXYMETHYL)OXETAN-2-YL]METHYL+TRIHYDROGEN+DIPHOSPHATE'>7D3</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.924Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7D3:[(2S,3R,4R)-4-(6-AMINO-9H-PURIN-9-YL)-3-(HYDROXYMETHYL)OXETAN-2-YL]METHYL+TRIHYDROGEN+DIPHOSPHATE'>7D3</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5tk6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5tk6 OCA], [https://pdbe.org/5tk6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5tk6 RCSB], [https://www.ebi.ac.uk/pdbsum/5tk6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5tk6 ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/O24769_PRIMG O24769_PRIMG] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 22: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Priestia megaterium]] |
| - | [[Category: | + | [[Category: Bridwell-Rabb J]] |
| - | [[Category: | + | [[Category: Drennan CL]] |
| - | + | ||
Current revision
Structure of the HD-domain phosphohydrolase OxsA with Oxetanocin-A diphosphate bound
| |||||||||||
