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|  | ==VCP like ATPase from T. acidophilum (VAT) - conformation 1== |  | ==VCP like ATPase from T. acidophilum (VAT) - conformation 1== | 
| - | <StructureSection load='5vc7' size='340' side='right' caption='[[5vc7]], [[Resolution|resolution]] 3.90Å' scene=''> | + | <SX load='5vc7' size='340' side='right' viewer='molstar' caption='[[5vc7]], [[Resolution|resolution]] 3.90Å' scene=''> | 
|  | == Structural highlights == |  | == Structural highlights == | 
| - | <table><tr><td colspan='2'>[[5vc7]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Theac Theac]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VC7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VC7 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5vc7]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum_DSM_1728 Thermoplasma acidophilum DSM 1728]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VC7 FirstGlance]. <br> | 
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.9Å</td></tr> | 
| - | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5vca|5vca]]</td></tr>
 | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene></td></tr> | 
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">vat, Ta0840 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=273075 THEAC])</td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vc7 OCA], [https://pdbe.org/5vc7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vc7 RCSB], [https://www.ebi.ac.uk/pdbsum/5vc7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vc7 ProSAT]</span></td></tr> | 
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vc7 OCA], [http://pdbe.org/5vc7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vc7 RCSB], [http://www.ebi.ac.uk/pdbsum/5vc7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vc7 ProSAT]</span></td></tr> | + |  | 
|  | </table> |  | </table> | 
|  | + | == Function == | 
|  | + | [https://www.uniprot.org/uniprot/VAT_THEAC VAT_THEAC]  | 
|  | <div style="background-color:#fffaf0;"> |  | <div style="background-color:#fffaf0;"> | 
|  | == Publication Abstract from PubMed == |  | == Publication Abstract from PubMed == | 
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|  | <references/> |  | <references/> | 
|  | __TOC__ |  | __TOC__ | 
| - | </StructureSection> | + | </SX> | 
| - | [[Category: Theac]] | + | [[Category: Large Structures]] | 
| - | [[Category: Augustyniak, R]] | + | [[Category: Thermoplasma acidophilum DSM 1728]] | 
| - | [[Category: Huang, R]] | + | [[Category: Augustyniak R]] | 
| - | [[Category: Kay, L E]] | + | [[Category: Huang R]] | 
| - | [[Category: Ripstein, Z A]] | + | [[Category: Kay LE]] | 
| - | [[Category: Rubinstein, J L]] | + | [[Category: Ripstein ZA]] | 
| - | [[Category: Aaa+]] | + | [[Category: Rubinstein JL]] | 
| - | [[Category: Atpase]]
 | + |  | 
| - | [[Category: Hydrolase]]
 | + |  | 
| - | [[Category: Unfoldase]]
 | + |  | 
|  |   Structural highlights   Function VAT_THEAC 
 
  Publication Abstract from PubMed AAA+ unfoldases are thought to unfold substrate through the central pore of their hexameric structures, but how this process occurs is not known. VAT, the Thermoplasma acidophilum homologue of eukaryotic CDC48/p97, works in conjunction with the proteasome to degrade misfolded or damaged proteins. We show that in the presence of ATP, VAT with its regulatory N-terminal domains removed unfolds other VAT complexes as substrate. We captured images of this transient process by electron cryomicroscopy (cryo-EM) to reveal the structure of the substrate-bound intermediate. Substrate binding breaks the six-fold symmetry of the complex, allowing five of the six VAT subunits to constrict into a tight helix that grips an ~80 A stretch of unfolded protein. The structure suggests a processive hand-over-hand unfolding mechanism, where each VAT subunit releases the substrate in turn before re-engaging further along the target protein, thereby unfolding it.
 Structure of a AAA+ unfoldase in the process of unfolding substrate.,Ripstein ZA, Huang R, Augustyniak R, Kay LE, Rubinstein JL Elife. 2017 Apr 8;6. pii: e25754. doi: 10.7554/eLife.25754. PMID:28390173[1]
 From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
   References ↑ Ripstein ZA, Huang R, Augustyniak R, Kay LE, Rubinstein JL. Structure of a AAA+ unfoldase in the process of unfolding substrate. Elife. 2017 Apr 8;6. pii: e25754. doi: 10.7554/eLife.25754. PMID:28390173 doi:http://dx.doi.org/10.7554/eLife.25754
 
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