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3nam
From Proteopedia
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==SR Ca(2+)-ATPase in the HnE2 state complexed with the Thapsigargin derivative dOTg== | ==SR Ca(2+)-ATPase in the HnE2 state complexed with the Thapsigargin derivative dOTg== | ||
| - | <StructureSection load='3nam' size='340' side='right' caption='[[3nam]], [[Resolution|resolution]] 3.10Å' scene=''> | + | <StructureSection load='3nam' size='340' side='right'caption='[[3nam]], [[Resolution|resolution]] 3.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3nam]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3nam]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NAM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NAM FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=OTK:(3S,3AR,4S,6S,6AS,8R,9R,9AR,9BS)-6-(ACETYLOXY)-4-(BUTANOYLOXY)-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-2-OXODODECAHYDROAZULENO[4,5-B]FURAN-8-YL+(2Z)-2-METHYLBUT-2-ENOATE'>OTK</scene>, <scene name='pdbligand=PTY:PHOSPHATIDYLETHANOLAMINE'>PTY</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=OTK:(3S,3AR,4S,6S,6AS,8R,9R,9AR,9BS)-6-(ACETYLOXY)-4-(BUTANOYLOXY)-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-2-OXODODECAHYDROAZULENO[4,5-B]FURAN-8-YL+(2Z)-2-METHYLBUT-2-ENOATE'>OTK</scene>, <scene name='pdbligand=PTY:PHOSPHATIDYLETHANOLAMINE'>PTY</scene></td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nam FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nam OCA], [https://pdbe.org/3nam PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nam RCSB], [https://www.ebi.ac.uk/pdbsum/3nam PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nam ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/B6CAM1_RABIT B6CAM1_RABIT] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/na/3nam_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/na/3nam_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
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</div> | </div> | ||
<div class="pdbe-citations 3nam" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 3nam" style="background-color:#fffaf0;"></div> | ||
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| + | ==See Also== | ||
| + | *[[ATPase 3D structures|ATPase 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
[[Category: Oryctolagus cuniculus]] | [[Category: Oryctolagus cuniculus]] | ||
| - | [[Category: Moller | + | [[Category: Moller JV]] |
| - | [[Category: Nissen | + | [[Category: Nissen P]] |
| - | [[Category: Olesen | + | [[Category: Olesen C]] |
| - | [[Category: Sonntag | + | [[Category: Sonntag Y]] |
| - | [[Category: Winther | + | [[Category: Winther AML]] |
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Current revision
SR Ca(2+)-ATPase in the HnE2 state complexed with the Thapsigargin derivative dOTg
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