This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5yqx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 5yqx is ON HOLD Authors: Xue, X., Zhang, Y., Wang, C., Song, M. Description: Crystal Structure Analysis of the BRD4 [[Category: Unreleased Structur...)
Current revision (10:24, 27 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 5yqx is ON HOLD
+
==Crystal Structure Analysis of the BRD4==
 +
<StructureSection load='5yqx' size='340' side='right'caption='[[5yqx]], [[Resolution|resolution]] 1.82&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[5yqx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5YQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5YQX FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.82&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=E0K:(2R)-2-(cyclopropylmethyl)-7-(3,5-dimethyl-1,2-oxazol-4-yl)-4H-1,4-benzoxazin-3-one'>E0K</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5yqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5yqx OCA], [https://pdbe.org/5yqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5yqx RCSB], [https://www.ebi.ac.uk/pdbsum/5yqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5yqx ProSAT]</span></td></tr>
 +
</table>
 +
== Disease ==
 +
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Note=A chromosomal aberration involving BRD4 is found in a rare, aggressive, and lethal carcinoma arising in midline organs of young people. Translocation t(15;19)(q14;p13) with NUT which produces a BRD4-NUT fusion protein.<ref>PMID:12543779</ref> <ref>PMID:11733348</ref>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/BRD4_HUMAN BRD4_HUMAN] Plays a role in a process governing chromosomal dynamics during mitosis (By similarity).
-
Authors: Xue, X., Zhang, Y., Wang, C., Song, M.
+
==See Also==
-
 
+
*[[Bromodomain-containing protein 3D structures|Bromodomain-containing protein 3D structures]]
-
Description: Crystal Structure Analysis of the BRD4
+
== References ==
-
[[Category: Unreleased Structures]]
+
<references/>
-
[[Category: Zhang, Y]]
+
__TOC__
-
[[Category: Wang, C]]
+
</StructureSection>
-
[[Category: Xue, X]]
+
[[Category: Homo sapiens]]
-
[[Category: Song, M]]
+
[[Category: Large Structures]]
 +
[[Category: Song M]]
 +
[[Category: Wang C]]
 +
[[Category: Xue X]]
 +
[[Category: Zhang Y]]

Current revision

Crystal Structure Analysis of the BRD4

PDB ID 5yqx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools