5m6a

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==Crystal structure of cardiotoxic Bence-Jones light chain dimer H9==
==Crystal structure of cardiotoxic Bence-Jones light chain dimer H9==
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<StructureSection load='5m6a' size='340' side='right' caption='[[5m6a]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
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<StructureSection load='5m6a' size='340' side='right'caption='[[5m6a]], [[Resolution|resolution]] 1.64&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5m6a]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M6A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5M6A FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5m6a]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5M6A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5M6A FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.64&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5m6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m6a OCA], [http://pdbe.org/5m6a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5m6a RCSB], [http://www.ebi.ac.uk/pdbsum/5m6a PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5m6a ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5m6a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5m6a OCA], [https://pdbe.org/5m6a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5m6a RCSB], [https://www.ebi.ac.uk/pdbsum/5m6a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5m6a ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Light chain amyloidosis (AL), the most common systemic amyloidosis, is caused by the overproduction and the aggregation of monoclonal immunoglobulin light chains (LC) in target organs. Due to genetic rearrangement and somatic hypermutation, virtually, each AL patient presents a different amyloidogenic LC. Because of such complexity, the fine molecular determinants of LC aggregation propensity and proteotoxicity are, to date, unclear; significantly, their decoding requires investigating large sets of cases. Aiming to achieve generalizable observations, we systematically characterised a pool of thirteen sequence-diverse full length LCs. Eight amyloidogenic LCs were selected as responsible for severe cardiac symptoms in patients; five non-amyloidogenic LCs were isolated from patients affected by multiple myeloma. Our comprehensive approach (consisting of spectroscopic techniques, limited proteolysis, and X-ray crystallography) shows that low fold stability and high protein dynamics correlate with amyloidogenic LCs, while hydrophobicity, structural rearrangements and nature of the LC dimeric association interface (as observed in seven crystal structures here presented) do not appear to play a significant role in defining amyloid propensity. Based on the structural and biophysical data, our results highlight shared properties driving LC amyloid propensity, and these data will be instrumental for the design of synthetic inhibitors of LC aggregation.
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Concurrent structural and biophysical traits link with immunoglobulin light chains amyloid propensity.,Oberti L, Rognoni P, Barbiroli A, Lavatelli F, Russo R, Maritan M, Palladini G, Bolognesi M, Merlini G, Ricagno S Sci Rep. 2017 Dec 1;7(1):16809. doi: 10.1038/s41598-017-16953-7. PMID:29196671<ref>PMID:29196671</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 5m6a" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Bacarizo, J]]
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[[Category: Large Structures]]
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[[Category: Bolognesi, M]]
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[[Category: Bacarizo J]]
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[[Category: Oberti, L]]
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[[Category: Bolognesi M]]
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[[Category: Ricagno, S]]
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[[Category: Oberti L]]
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[[Category: Rognoni, P]]
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[[Category: Ricagno S]]
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[[Category: Immune system]]
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[[Category: Rognoni P]]
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[[Category: Immunoglobulin fold]]
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[[Category: Light chain amyloidosis]]
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[[Category: Light chain dimer]]
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[[Category: Protein aggregation]]
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Current revision

Crystal structure of cardiotoxic Bence-Jones light chain dimer H9

PDB ID 5m6a

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