2ah5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:48, 30 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ah5.gif|left|200px]]
 
-
{{Structure
+
==Hydrolase, haloacid dehalogenase-like family protein SP0104 from Streptococcus pneumoniae==
-
|PDB= 2ah5 |SIZE=350|CAPTION= <scene name='initialview01'>2ah5</scene>, resolution 1.74&Aring;
+
<StructureSection load='2ah5' size='340' side='right'caption='[[2ah5]], [[Resolution|resolution]] 1.74&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2ah5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AH5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AH5 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.74&#8491;</td></tr>
-
|GENE= SP0104 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1313 Streptococcus pneumoniae])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG0546 Gph]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ah5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ah5 OCA], [https://pdbe.org/2ah5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ah5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ah5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ah5 ProSAT], [https://www.topsan.org/Proteins/MCSG/2ah5 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ah5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ah5 OCA], [http://www.ebi.ac.uk/pdbsum/2ah5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ah5 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/A0A0H2UN22_STRPN A0A0H2UN22_STRPN]
-
 
+
== Evolutionary Conservation ==
-
'''Hydrolase, haloacid dehalogenase-like family protein SP0104 from Streptococcus pneumoniae'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ah/2ah5_consurf.spt"</scriptWhenChecked>
-
2AH5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AH5 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Streptococcus pneumoniae]]
+
</jmolCheckbox>
-
[[Category: Abdullah, J.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ah5 ConSurf].
-
[[Category: Binkowski, T A.]]
+
<div style="clear:both"></div>
-
[[Category: Collart, F.]]
+
__TOC__
-
[[Category: Joachimiak, A.]]
+
</StructureSection>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Large Structures]]
-
[[Category: Mcsg]]
+
[[Category: Streptococcus pneumoniae TIGR4]]
-
[[Category: Zhou, M.]]
+
[[Category: Abdullah J]]
-
[[Category: haloacid dehalogenase-like]]
+
[[Category: Binkowski TA]]
-
[[Category: hydrolase]]
+
[[Category: Collart F]]
-
[[Category: mcsg]]
+
[[Category: Joachimiak A]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: MCSG]]
-
[[Category: protein structure initiative]]
+
[[Category: Zhou M]]
-
[[Category: psi]]
+
-
[[Category: streptococcus pneumoniae]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:52:33 2008''
+

Current revision

Hydrolase, haloacid dehalogenase-like family protein SP0104 from Streptococcus pneumoniae

PDB ID 2ah5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools