This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
5dkv
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==Crystal Structure of an ABC transporter Solute Binding Protein from Agrobacterium vitis(Avis_5339, TARGET EFI-511225) bound with alpha-D-Tagatopyranose== | ==Crystal Structure of an ABC transporter Solute Binding Protein from Agrobacterium vitis(Avis_5339, TARGET EFI-511225) bound with alpha-D-Tagatopyranose== | ||
| - | <StructureSection load='5dkv' size='340' side='right' caption='[[5dkv]], [[Resolution|resolution]] 1.68Å' scene=''> | + | <StructureSection load='5dkv' size='340' side='right'caption='[[5dkv]], [[Resolution|resolution]] 1.68Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5dkv]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5dkv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_vitis_S4 Agrobacterium vitis S4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5DKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5DKV FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.68Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=T6T:ALPHA-D-TAGATOPYRANOSE'>T6T</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5dkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5dkv OCA], [https://pdbe.org/5dkv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5dkv RCSB], [https://www.ebi.ac.uk/pdbsum/5dkv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5dkv ProSAT]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/B9K0T2_AGRVS B9K0T2_AGRVS] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Agrobacterium vitis S4]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Al Obaidi NF]] |
| - | [[Category: | + | [[Category: Almo SC]] |
| - | [[Category: | + | [[Category: Attonito JD]] |
| - | [[Category: | + | [[Category: Benach J]] |
| - | [[Category: | + | [[Category: Chamala S]] |
| - | [[Category: | + | [[Category: Chowdhury S]] |
| - | [[Category: | + | [[Category: Gerlt JA]] |
| - | [[Category: Koss | + | [[Category: Koss J]] |
| - | [[Category: Lafleur | + | [[Category: Lafleur J]] |
| - | [[Category: Love | + | [[Category: Love J]] |
| - | [[Category: Morisco | + | [[Category: Morisco LL]] |
| - | [[Category: | + | [[Category: Scott Glenn A]] |
| - | [[Category: Seidel | + | [[Category: Seidel RD]] |
| - | [[Category: Wasserman | + | [[Category: Wasserman SR]] |
| - | [[Category: Whalen | + | [[Category: Whalen KL]] |
| - | [[Category: Yadava | + | [[Category: Yadava U]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Crystal Structure of an ABC transporter Solute Binding Protein from Agrobacterium vitis(Avis_5339, TARGET EFI-511225) bound with alpha-D-Tagatopyranose
| |||||||||||
Categories: Agrobacterium vitis S4 | Large Structures | Al Obaidi NF | Almo SC | Attonito JD | Benach J | Chamala S | Chowdhury S | Gerlt JA | Koss J | Lafleur J | Love J | Morisco LL | Scott Glenn A | Seidel RD | Wasserman SR | Whalen KL | Yadava U
