4dxg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:44, 8 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of Staphylococcal Superantigen-Like protein 4 complexed with sialyl Lewis X==
==Crystal structure of Staphylococcal Superantigen-Like protein 4 complexed with sialyl Lewis X==
-
<StructureSection load='4dxg' size='340' side='right' caption='[[4dxg]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='4dxg' size='340' side='right'caption='[[4dxg]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4dxg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Staae Staae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DXG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4DXG FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4dxg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_str._Newman Staphylococcus aureus subsp. aureus str. Newman]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DXG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DXG FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PIN:PIPERAZINE-N,N-BIS(2-ETHANESULFONIC+ACID)'>PIN</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4dxf|4dxf]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene>, <scene name='pdbligand=PIN:PIPERAZINE-N,N-BIS(2-ETHANESULFONIC+ACID)'>PIN</scene>, <scene name='pdbligand=PRD_900122:Sialyl-Lewis+X+antigen,+alpha+anomer'>PRD_900122</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NWMN_0391, ssl4nm ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=426430 STAAE])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dxg OCA], [https://pdbe.org/4dxg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dxg RCSB], [https://www.ebi.ac.uk/pdbsum/4dxg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dxg ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4dxg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dxg OCA], [http://pdbe.org/4dxg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4dxg RCSB], [http://www.ebi.ac.uk/pdbsum/4dxg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4dxg ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SSL4_STAAE SSL4_STAAE] Secreted protein that plays a role in immune innate response inhibition by interfering with host TLR2-mediated pathway.[UniProtKB:Q2G1S8]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Staae]]
+
[[Category: Large Structures]]
-
[[Category: Baker, E N]]
+
[[Category: Staphylococcus aureus subsp. aureus str. Newman]]
-
[[Category: Baker, H M]]
+
[[Category: Baker EN]]
-
[[Category: Fraser, J F]]
+
[[Category: Baker HM]]
-
[[Category: Hermans, S J]]
+
[[Category: Fraser JF]]
-
[[Category: Langley, R J]]
+
[[Category: Hermans SJ]]
-
[[Category: Beta grasp fold]]
+
[[Category: Langley RJ]]
-
[[Category: Carbohydrate binding]]
+
-
[[Category: Oligonucleotide/oligosaccharide binding fold]]
+
-
[[Category: Sugar binding protein]]
+
-
[[Category: Superantigen fold]]
+

Current revision

Crystal structure of Staphylococcal Superantigen-Like protein 4 complexed with sialyl Lewis X

PDB ID 4dxg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4dxg"
Personal tools