5wcg

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m (Protected "5wcg" [edit=sysop:move=sysop])
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==SET and MYND Domain Containing protein 2==
==SET and MYND Domain Containing protein 2==
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<StructureSection load='5wcg' size='340' side='right' caption='[[5wcg]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
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<StructureSection load='5wcg' size='340' side='right'caption='[[5wcg]], [[Resolution|resolution]] 2.02&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5wcg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WCG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5WCG FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5wcg]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WCG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5WCG FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=A4M:[3-(6-amino-2-methyl-9H-purin-9-yl)azetidin-1-yl]{5-[(4-cycloheptylpiperazin-1-yl)methyl]-1-methyl-1H-pyrazol-3-yl}methanone'>A4M</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.02&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SMYD2, KMT3C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A4M:[3-(6-amino-2-methyl-9H-purin-9-yl)azetidin-1-yl]{5-[(4-cycloheptylpiperazin-1-yl)methyl]-1-methyl-1H-pyrazol-3-yl}methanone'>A4M</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5wcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wcg OCA], [http://pdbe.org/5wcg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5wcg RCSB], [http://www.ebi.ac.uk/pdbsum/5wcg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5wcg ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5wcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5wcg OCA], [https://pdbe.org/5wcg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5wcg RCSB], [https://www.ebi.ac.uk/pdbsum/5wcg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5wcg ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/SMYD2_HUMAN SMYD2_HUMAN]] Protein-lysine N-methyltransferase that methylates both histones and non-histone proteins. Specifically methylates histone H3 'Lys-4' (H3K4me) and dimethylates histone H3 'Lys-36' (H3K36me2). Has also methyltransferase activity toward non-histone proteins such as p53/TP53 and RB1. Monomethylates 'Lys-370' of p53/TP53, leading to decreased DNA-binding activity and subsequent transcriptional regulation activity of p53/TP53. Monomethylates 'Lys-860' of RB1/RB.<ref>PMID:17108971</ref> <ref>PMID:17805299</ref> <ref>PMID:18065756</ref> <ref>PMID:20870719</ref>
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[https://www.uniprot.org/uniprot/SMYD2_HUMAN SMYD2_HUMAN] Protein-lysine N-methyltransferase that methylates both histones and non-histone proteins. Specifically methylates histone H3 'Lys-4' (H3K4me) and dimethylates histone H3 'Lys-36' (H3K36me2). Has also methyltransferase activity toward non-histone proteins such as p53/TP53 and RB1. Monomethylates 'Lys-370' of p53/TP53, leading to decreased DNA-binding activity and subsequent transcriptional regulation activity of p53/TP53. Monomethylates 'Lys-860' of RB1/RB.<ref>PMID:17108971</ref> <ref>PMID:17805299</ref> <ref>PMID:18065756</ref> <ref>PMID:20870719</ref>
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==See Also==
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*[[Histone methyltransferase 3D structures|Histone methyltransferase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Arrowsmith, C H]]
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[[Category: Large Structures]]
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[[Category: Bountra, C]]
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[[Category: Arrowsmith CH]]
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[[Category: Brown, P J]]
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[[Category: Bountra C]]
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[[Category: Casimiro-Garcia, A]]
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[[Category: Brown PJ]]
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[[Category: Dong, A]]
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[[Category: Casimiro-Garcia A]]
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[[Category: Edwards, A M]]
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[[Category: Dong A]]
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[[Category: Hutch, A]]
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[[Category: Edwards AM]]
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[[Category: Kumpf, R]]
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[[Category: Hutch A]]
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[[Category: Owen, A]]
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[[Category: Kumpf R]]
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[[Category: Structural genomic]]
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[[Category: Owen A]]
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[[Category: Seitova, A]]
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[[Category: Seitova A]]
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[[Category: Tatlock, J]]
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[[Category: Tatlock J]]
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[[Category: Taylor, A]]
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[[Category: Taylor A]]
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[[Category: Walker, J R]]
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[[Category: Walker JR]]
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[[Category: Wu, H]]
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[[Category: Wu H]]
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[[Category: Zeng, H]]
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[[Category: Zeng H]]
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[[Category: Sgc]]
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[[Category: Transferase]]
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[[Category: Zinc finger]]
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Current revision

SET and MYND Domain Containing protein 2

PDB ID 5wcg

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