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| ==Structure of F-ATPase from Pichia angusta, state1== | | ==Structure of F-ATPase from Pichia angusta, state1== |
- | <StructureSection load='5lqz' size='340' side='right' caption='[[5lqz]], [[Resolution|resolution]] 7.00Å' scene=''> | + | <SX load='5lqz' size='340' side='right' viewer='molstar' caption='[[5lqz]], [[Resolution|resolution]] 7.00Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5lqz]] is a 30 chain structure with sequence from [http://en.wikipedia.org/wiki/Ogataea_angusta Ogataea angusta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LQZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5LQZ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5lqz]] is a 14 chain structure with sequence from [https://en.wikipedia.org/wiki/Ogataea_angusta Ogataea angusta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LQZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LQZ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 7Å</td></tr> |
- | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5lqz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lqz OCA], [http://pdbe.org/5lqz PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lqz RCSB], [http://www.ebi.ac.uk/pdbsum/5lqz PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lqz ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lqz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lqz OCA], [https://pdbe.org/5lqz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lqz RCSB], [https://www.ebi.ac.uk/pdbsum/5lqz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lqz ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/W1Q6W1_OGAPD W1Q6W1_OGAPD] Produces ATP from ADP in the presence of a proton gradient across the membrane.[RuleBase:RU003551] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| </div> | | </div> |
| <div class="pdbe-citations 5lqz" style="background-color:#fffaf0;"></div> | | <div class="pdbe-citations 5lqz" style="background-color:#fffaf0;"></div> |
| + | |
| + | ==See Also== |
| + | *[[ATPase 3D structures|ATPase 3D structures]] |
| == References == | | == References == |
| <references/> | | <references/> |
| __TOC__ | | __TOC__ |
- | </StructureSection> | + | </SX> |
| + | [[Category: Large Structures]] |
| [[Category: Ogataea angusta]] | | [[Category: Ogataea angusta]] |
- | [[Category: Liu, S]] | + | [[Category: Liu S]] |
- | [[Category: Montgomery, M G]] | + | [[Category: Montgomery MG]] |
- | [[Category: Vinothkumar, K R]] | + | [[Category: Vinothkumar KR]] |
- | [[Category: Walker, J E]] | + | [[Category: Walker JE]] |
- | [[Category: Atp synthase]]
| + | |
- | [[Category: Hydrolase]]
| + | |
| Structural highlights
Function
W1Q6W1_OGAPD Produces ATP from ADP in the presence of a proton gradient across the membrane.[RuleBase:RU003551]
Publication Abstract from PubMed
The structure of the intact monomeric ATP synthase from the fungus, Pichia angusta, has been solved by electron cryo-microscopy. The structure provides insights into the mechanical coupling of the transmembrane proton motive force across mitochondrial membranes in the synthesis of ATP. This mechanism requires a strong and integral stator, consisting of the catalytic alpha3beta3-domain, peripheral stalk, and, in the membrane domain, subunit a and associated supernumerary subunits, kept in contact with the rotor turning at speeds up to 350 Hz. The stator's integrity is ensured by robust attachment of both the oligomycin sensitivity conferral protein (OSCP) to the catalytic domain and the membrane domain of subunit b to subunit a. The ATP8 subunit provides an additional brace between the peripheral stalk and subunit a. At the junction between the OSCP and the apparently stiff, elongated alpha-helical b-subunit and associated d- and h-subunits, an elbow or joint allows the stator to bend to accommodate lateral movements during the activity of the catalytic domain. The stator may also apply lateral force to help keep the static a-subunit and rotating c10-ring together. The interface between the c10-ring and the a-subunit contains the transmembrane pathway for protons, and their passage across the membrane generates the turning of the rotor. The pathway has two half-channels containing conserved polar residues provided by a bundle of four alpha-helices inclined at approximately 30 degrees to the plane of the membrane, similar to those described in other species. The structure provides more insights into the workings of this amazing machine.
Structure of the mitochondrial ATP synthase from Pichia angusta determined by electron cryo-microscopy.,Vinothkumar KR, Montgomery MG, Liu S, Walker JE Proc Natl Acad Sci U S A. 2016 Oct 24. pii: 201615902. PMID:27791192[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Vinothkumar KR, Montgomery MG, Liu S, Walker JE. Structure of the mitochondrial ATP synthase from Pichia angusta determined by electron cryo-microscopy. Proc Natl Acad Sci U S A. 2016 Oct 24. pii: 201615902. PMID:27791192 doi:http://dx.doi.org/10.1073/pnas.1615902113
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