2ybd

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:11, 23 August 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of probable had family hydrolase from pseudomonas fluorescens pf-5 with bound phosphate==
==Crystal structure of probable had family hydrolase from pseudomonas fluorescens pf-5 with bound phosphate==
-
<StructureSection load='2ybd' size='340' side='right' caption='[[2ybd]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+
<StructureSection load='2ybd' size='340' side='right'caption='[[2ybd]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ybd]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Psef5 Psef5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YBD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YBD FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ybd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_protegens_Pf-5 Pseudomonas protegens Pf-5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YBD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YBD FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.001&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ybd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ybd OCA], [http://pdbe.org/2ybd PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2ybd RCSB], [http://www.ebi.ac.uk/pdbsum/2ybd PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2ybd ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ybd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ybd OCA], [https://pdbe.org/2ybd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ybd RCSB], [https://www.ebi.ac.uk/pdbsum/2ybd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ybd ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q4K5L5_PSEF5 Q4K5L5_PSEF5]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Psef5]]
+
[[Category: Large Structures]]
-
[[Category: Allen, K N]]
+
[[Category: Pseudomonas protegens Pf-5]]
-
[[Category: Almo, S C]]
+
[[Category: Allen KN]]
-
[[Category: Burley, S K]]
+
[[Category: Almo SC]]
-
[[Category: Dunaway-Mariano, D]]
+
[[Category: Burley SK]]
-
[[Category: Freeman, J]]
+
[[Category: Dunaway-Mariano D]]
-
[[Category: Gerlt, J A]]
+
[[Category: Freeman J]]
-
[[Category: Miller, S]]
+
[[Category: Gerlt JA]]
-
[[Category: Patskovsky, Y]]
+
[[Category: Miller S]]
-
[[Category: Sauder, J M]]
+
[[Category: Patskovsky Y]]
-
[[Category: Toro, R]]
+
[[Category: Sauder JM]]
-
[[Category: Vetting, M W]]
+
[[Category: Toro R]]
-
[[Category: Hydrolase]]
+
[[Category: Vetting MW]]
-
[[Category: PSI, Protein structure initiative]]
+

Current revision

Crystal structure of probable had family hydrolase from pseudomonas fluorescens pf-5 with bound phosphate

PDB ID 2ybd

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools