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| ==Crystal structure of GEMC1 coiled-coil domain== | | ==Crystal structure of GEMC1 coiled-coil domain== |
- | <StructureSection load='5c9n' size='340' side='right' caption='[[5c9n]], [[Resolution|resolution]] 2.20Å' scene=''> | + | <StructureSection load='5c9n' size='340' side='right'caption='[[5c9n]], [[Resolution|resolution]] 2.20Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5c9n]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C9N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5C9N FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5c9n]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5C9N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5C9N FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GMNC, GEMC1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5c9n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c9n OCA], [http://pdbe.org/5c9n PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5c9n RCSB], [http://www.ebi.ac.uk/pdbsum/5c9n PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5c9n ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5c9n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5c9n OCA], [https://pdbe.org/5c9n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5c9n RCSB], [https://www.ebi.ac.uk/pdbsum/5c9n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5c9n ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/GEMC1_HUMAN GEMC1_HUMAN]] Regulator of DNA replication. Promotes initiation of chromosomal DNA replication by mediating TOPBP1- and CDK2-dependent recruitment of CDC45L onto replication origins (By similarity). | + | [https://www.uniprot.org/uniprot/GEMC1_HUMAN GEMC1_HUMAN] Regulator of DNA replication. Promotes initiation of chromosomal DNA replication by mediating TOPBP1- and CDK2-dependent recruitment of CDC45L onto replication origins (By similarity). |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Human]] | + | [[Category: Homo sapiens]] |
- | [[Category: Caillat, C]] | + | [[Category: Large Structures]] |
- | [[Category: Perrakis, A]] | + | [[Category: Caillat C]] |
- | [[Category: Cell cycle]] | + | [[Category: Perrakis A]] |
- | [[Category: Geminin idas coiled coil dna replication license]]
| + | |
| Structural highlights
Function
GEMC1_HUMAN Regulator of DNA replication. Promotes initiation of chromosomal DNA replication by mediating TOPBP1- and CDK2-dependent recruitment of CDC45L onto replication origins (By similarity).
Publication Abstract from PubMed
GemC1, together with Idas and Geminin, an important regulator of DNA-replication licensing and differentiation decisions, constitute a superfamily sharing a homologous central coiled-coil domain. To better understand this family of proteins, the crystal structure of a GemC1 coiled-coil domain variant engineered for better solubility was determined to 2.2 A resolution. GemC1 shows a less typical coiled coil compared with the Geminin homodimer and the Geminin-Idas heterodimer structures. It is also shown that both in vitro and in cells GemC1 interacts with Geminin through its coiled-coil domain, forming a heterodimer that is more stable that the GemC1 homodimer. Comparative analysis of the thermal stability of all of the possible superfamily complexes, using circular dichroism to follow the unfolding of the entire helix of the coiled coil, or intrinsic tryptophan fluorescence of a unique conserved N-terminal tryptophan, shows that the unfolding of the coiled coil is likely to take place from the C-terminus towards the N-terminus. It is also shown that homodimers show a single-state unfolding, while heterodimers show a two-state unfolding, suggesting that the dimer first falls apart and the helices then unfold according to the stability of each protein. The findings argue that Geminin-family members form homodimers and heterodimers between them, and this ability is likely to be important for modulating their function in cycling and differentiating cells.
The structure of the GemC1 coiled coil and its interaction with the Geminin family of coiled-coil proteins.,Caillat C, Fish A, Pefani DE, Taraviras S, Lygerou Z, Perrakis A Acta Crystallogr D Biol Crystallogr. 2015 Nov 1;71(Pt 11):2278-86. doi:, 10.1107/S1399004715016892. Epub 2015 Oct 31. PMID:26527144[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Caillat C, Fish A, Pefani DE, Taraviras S, Lygerou Z, Perrakis A. The structure of the GemC1 coiled coil and its interaction with the Geminin family of coiled-coil proteins. Acta Crystallogr D Biol Crystallogr. 2015 Nov 1;71(Pt 11):2278-86. doi:, 10.1107/S1399004715016892. Epub 2015 Oct 31. PMID:26527144 doi:http://dx.doi.org/10.1107/S1399004715016892
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