This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4q0w
From Proteopedia
(Difference between revisions)
| (One intermediate revision not shown.) | |||
| Line 1: | Line 1: | ||
==he catalytic core of Rad2 in complex with DNA substrate (complex II)== | ==he catalytic core of Rad2 in complex with DNA substrate (complex II)== | ||
| - | <StructureSection load='4q0w' size='340' side='right' caption='[[4q0w]], [[Resolution|resolution]] 2.10Å' scene=''> | + | <StructureSection load='4q0w' size='340' side='right'caption='[[4q0w]], [[Resolution|resolution]] 2.10Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4q0w]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[4q0w]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4Q0W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4Q0W FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr> |
| - | < | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4q0w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4q0w OCA], [https://pdbe.org/4q0w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4q0w RCSB], [https://www.ebi.ac.uk/pdbsum/4q0w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4q0w ProSAT]</span></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/RAD2_YEAST RAD2_YEAST] Single-stranded DNA endonuclease involved in excision repair of DNA damaged with UV light, bulky adducts, or cross-linking agents. Essential for the incision step of excision-repair.<ref>PMID:8247134</ref> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 24: | Line 23: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Jaciuk | + | [[Category: Saccharomyces cerevisiae S288C]] |
| - | [[Category: Kustosz | + | [[Category: Jaciuk M]] |
| - | [[Category: Mietus | + | [[Category: Kustosz P]] |
| - | [[Category: Nowak | + | [[Category: Mietus M]] |
| - | [[Category: Nowotny | + | [[Category: Nowak E]] |
| - | + | [[Category: Nowotny M]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
he catalytic core of Rad2 in complex with DNA substrate (complex II)
| |||||||||||
