This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6b3p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:32, 4 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of CBMbc (family CBM26) from Eubacterium rectale Amy13K in Complex with Maltoheptaose==
==Crystal structure of CBMbc (family CBM26) from Eubacterium rectale Amy13K in Complex with Maltoheptaose==
-
<StructureSection load='6b3p' size='340' side='right' caption='[[6b3p]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
+
<StructureSection load='6b3p' size='340' side='right'caption='[[6b3p]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6b3p]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agathobacter_rectalis_m104/1 Agathobacter rectalis m104/1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6B3P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6B3P FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6b3p]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Eubacterium_rectale_M104/1 Eubacterium rectale M104/1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6B3P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6B3P FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.01&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[6az5|6az5]], [[6b15|6b15]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900009:alpha-maltotriose'>PRD_900009</scene>, <scene name='pdbligand=PRD_900010:alpha-maltotetraose'>PRD_900010</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ERE_20420 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=657317 Agathobacter rectalis M104/1])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6b3p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6b3p OCA], [https://pdbe.org/6b3p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6b3p RCSB], [https://www.ebi.ac.uk/pdbsum/6b3p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6b3p ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6b3p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6b3p OCA], [http://pdbe.org/6b3p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6b3p RCSB], [http://www.ebi.ac.uk/pdbsum/6b3p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6b3p ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/D4JJZ5_9FIRM D4JJZ5_9FIRM]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 6b3p" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6b3p" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Cyclin-dependent kinase 3D structures|Cyclin-dependent kinase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Agathobacter rectalis m104/1]]
+
[[Category: Large Structures]]
-
[[Category: Cockburn, D W]]
+
[[Category: Cockburn DW]]
-
[[Category: Koropatkin, N M]]
+
[[Category: Koropatkin NM]]
-
[[Category: Medina, K Perez]]
+
[[Category: Perez Medina K]]
-
[[Category: Wawrzak, Z]]
+
[[Category: Wawrzak Z]]
-
[[Category: Amylase]]
+
-
[[Category: Carbohydrate binding module]]
+
-
[[Category: Eubacterium rectale]]
+
-
[[Category: Gut microbiome]]
+
-
[[Category: Starch]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

Crystal structure of CBMbc (family CBM26) from Eubacterium rectale Amy13K in Complex with Maltoheptaose

PDB ID 6b3p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6b3p"
Personal tools