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| ==Crystal Structure of 5C4 Fab== | | ==Crystal Structure of 5C4 Fab== |
- | <StructureSection load='5w24' size='340' side='right' caption='[[5w24]], [[Resolution|resolution]] 1.50Å' scene=''> | + | <StructureSection load='5w24' size='340' side='right'caption='[[5w24]], [[Resolution|resolution]] 1.50Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[5w24]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W24 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5W24 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[5w24]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5W24 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5W24 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BU3:(R,R)-2,3-BUTANEDIOL'>BU3</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5w24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w24 OCA], [http://pdbe.org/5w24 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5w24 RCSB], [http://www.ebi.ac.uk/pdbsum/5w24 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5w24 ProSAT]</span></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BU3:(R,R)-2,3-BUTANEDIOL'>BU3</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5w24 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5w24 OCA], [https://pdbe.org/5w24 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5w24 RCSB], [https://www.ebi.ac.uk/pdbsum/5w24 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5w24 ProSAT]</span></td></tr> |
| </table> | | </table> |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Lk3 transgenic mice]] | + | [[Category: Large Structures]] |
- | [[Category: Battles, M B]] | + | [[Category: Mus musculus]] |
- | [[Category: McLellan, J S]] | + | [[Category: Battles MB]] |
- | [[Category: Taher, N M]] | + | [[Category: McLellan JS]] |
- | [[Category: Antibody]] | + | [[Category: Taher NM]] |
- | [[Category: Fab]]
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- | [[Category: Immune system]]
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- | [[Category: Neutralizing antibody]]
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| Structural highlights
Publication Abstract from PubMed
A licensed vaccine for respiratory syncytial virus (RSV) is unavailable, and passive prophylaxis with the antibody palivizumab is restricted to high-risk infants. Recently isolated antibodies 5C4 and D25 are substantially more potent than palivizumab, and a derivative of D25 is in clinical trials. Here we show that unlike D25, 5C4 preferentially neutralizes subtype A viruses. The crystal structure of 5C4 bound to the RSV fusion (F) protein reveals that the overall binding mode of 5C4 is similar to that of D25, but their angles of approach are substantially different. Mutagenesis and virological studies demonstrate that RSV F residue 201 is largely responsible for the subtype specificity of 5C4. These results improve our understanding of subtype-specific immunity and the neutralization breadth requirements of next-generation antibodies, and thereby contribute to the design of broadly protective RSV vaccines.
Structural basis of respiratory syncytial virus subtype-dependent neutralization by an antibody targeting the fusion glycoprotein.,Tian D, Battles MB, Moin SM, Chen M, Modjarrad K, Kumar A, Kanekiyo M, Graepel KW, Taher NM, Hotard AL, Moore ML, Zhao M, Zheng ZZ, Xia NS, McLellan JS, Graham BS Nat Commun. 2017 Nov 30;8(1):1877. doi: 10.1038/s41467-017-01858-w. PMID:29187732[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Tian D, Battles MB, Moin SM, Chen M, Modjarrad K, Kumar A, Kanekiyo M, Graepel KW, Taher NM, Hotard AL, Moore ML, Zhao M, Zheng ZZ, Xia NS, McLellan JS, Graham BS. Structural basis of respiratory syncytial virus subtype-dependent neutralization by an antibody targeting the fusion glycoprotein. Nat Commun. 2017 Nov 30;8(1):1877. doi: 10.1038/s41467-017-01858-w. PMID:29187732 doi:http://dx.doi.org/10.1038/s41467-017-01858-w
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