6bit

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==SIRPalpha antibody complex==
==SIRPalpha antibody complex==
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<StructureSection load='6bit' size='340' side='right' caption='[[6bit]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
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<StructureSection load='6bit' size='340' side='right'caption='[[6bit]], [[Resolution|resolution]] 2.19&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6bit]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human] and [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BIT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6BIT FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6bit]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BIT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6BIT FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.191&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SIRPA, BIT, MFR, MYD1, PTPNS1, SHPS1, SIRP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6bit FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bit OCA], [http://pdbe.org/6bit PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6bit RCSB], [http://www.ebi.ac.uk/pdbsum/6bit PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6bit ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6bit FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6bit OCA], [https://pdbe.org/6bit PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6bit RCSB], [https://www.ebi.ac.uk/pdbsum/6bit PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6bit ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/SHPS1_HUMAN SHPS1_HUMAN]] Immunoglobulin-like cell surface receptor for CD47. Acts as docking protein and induces translocation of PTPN6, PTPN11 and other binding partners from the cytosol to the plasma membrane. Supports adhesion of cerebellar neurons, neurite outgrowth and glial cell attachment. May play a key role in intracellular signaling during synaptogenesis and in synaptic function (By similarity). Involved in the negative regulation of receptor tyrosine kinase-coupled cellular responses induced by cell adhesion, growth factors or insulin. Mediates negative regulation of phagocytosis, mast cell activation and dendritic cell activation. CD47 binding prevents maturation of immature dendritic cells and inhibits cytokine production by mature dendritic cells.<ref>PMID:10469599</ref> <ref>PMID:11509594</ref>
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[https://www.uniprot.org/uniprot/SHPS1_HUMAN SHPS1_HUMAN] Immunoglobulin-like cell surface receptor for CD47. Acts as docking protein and induces translocation of PTPN6, PTPN11 and other binding partners from the cytosol to the plasma membrane. Supports adhesion of cerebellar neurons, neurite outgrowth and glial cell attachment. May play a key role in intracellular signaling during synaptogenesis and in synaptic function (By similarity). Involved in the negative regulation of receptor tyrosine kinase-coupled cellular responses induced by cell adhesion, growth factors or insulin. Mediates negative regulation of phagocytosis, mast cell activation and dendritic cell activation. CD47 binding prevents maturation of immature dendritic cells and inhibits cytokine production by mature dendritic cells.<ref>PMID:10469599</ref> <ref>PMID:11509594</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6bit" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6bit" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]]
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*[[Tyrosine phosphatase 3D structures|Tyrosine phosphatase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Human]]
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
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[[Category: Flavell, R A]]
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[[Category: Flavell RA]]
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[[Category: George, B M]]
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[[Category: George BM]]
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[[Category: Herndler-Brandstetter, D]]
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[[Category: Herndler-Brandstetter D]]
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[[Category: Lietzenmayer, M]]
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[[Category: Lietzenmayer M]]
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[[Category: McCarty, A]]
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[[Category: McCarty A]]
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[[Category: McKenna, K M]]
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[[Category: McKenna KM]]
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[[Category: Naik, T J]]
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[[Category: Naik TJ]]
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[[Category: Ring, A M]]
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[[Category: Ring AM]]
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[[Category: Ring, N G]]
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[[Category: Ring NG]]
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[[Category: Shan, L]]
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[[Category: Shan L]]
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[[Category: Volkmer, J P]]
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[[Category: Volkmer JP]]
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[[Category: Weiskopf, K]]
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[[Category: Weiskopf K]]
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[[Category: Weissman, I L]]
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[[Category: Weissman IL]]
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[[Category: Zheng, Y]]
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[[Category: Zheng Y]]
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[[Category: Cancer immunotherapy]]
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[[Category: Cd47]]
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[[Category: Immune checkpoint]]
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[[Category: Immune system]]
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[[Category: Macrophage]]
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[[Category: Myeloid]]
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[[Category: Neutrophil]]
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[[Category: Phagocytosis]]
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[[Category: Sirp]]
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Current revision

SIRPalpha antibody complex

PDB ID 6bit

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