5on6

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'''Unreleased structure'''
 
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The entry 5on6 is ON HOLD until Paper Publication
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==Crystal structure of haemanthamine bound to the 80S ribosome==
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<StructureSection load='5on6' size='340' side='right'caption='[[5on6]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5on6]] is a 20 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ON6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ON6 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1000023&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HN8:Haemanthamine'>HN8</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OHX:OSMIUM+(III)+HEXAMMINE'>OHX</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5on6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5on6 OCA], [https://pdbe.org/5on6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5on6 RCSB], [https://www.ebi.ac.uk/pdbsum/5on6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5on6 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RL2A_YEAST RL2A_YEAST]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Alkaloids isolated from the Amaryllidaceae plants have potential as therapeutics for treating human diseases. Haemanthamine has been studied as a novel anticancer agent due to its ability to overcome cancer cell resistance to apoptosis. Biochemical experiments have suggested that hemanthamine targets the ribosome. However, a structural characterization of its mechanism has been missing. Here we present the 3.1 A resolution X-ray structure of haemanthamine bound to the Saccharomyces cerevisiae 80S ribosome. This structure reveals that haemanthamine targets the A-site cleft on the large ribosomal subunit rearranging rRNA to halt the elongation phase of translation. Furthermore, we provide evidence that haemanthamine and other Amaryllidaceae alkaloids also inhibit specifically ribosome biogenesis, triggering nucleolar stress response and leading to p53 stabilization in cancer cells. Together with a computer-aided interpretation of existing structure-activity relationships of Amaryllidaceae alkaloids congeners, we provide a rationale for designing molecules with enhanced potencies and reduced toxicities.
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Authors: Pellegrino, S., Meyer, M., Yusupova, G., Yusupov, M.
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The Amaryllidaceae Alkaloid Haemanthamine Binds the Eukaryotic Ribosome to Repress Cancer Cell Growth.,Pellegrino S, Meyer M, Zorbas C, Bouchta SA, Saraf K, Pelly SC, Yusupova G, Evidente A, Mathieu V, Kornienko A, Lafontaine DLJ, Yusupov M Structure. 2018 Feb 3. pii: S0969-2126(18)30009-1. doi:, 10.1016/j.str.2018.01.009. PMID:29429877<ref>PMID:29429877</ref>
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Description: Crystal structure of haemanthamine bound to the 80S ribosome
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Yusupov, M]]
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<div class="pdbe-citations 5on6" style="background-color:#fffaf0;"></div>
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[[Category: Pellegrino, S]]
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[[Category: Yusupova, G]]
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==See Also==
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[[Category: Meyer, M]]
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*[[Ribosome 3D structures|Ribosome 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Saccharomyces cerevisiae S288C]]
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[[Category: Meyer M]]
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[[Category: Pellegrino S]]
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[[Category: Yusupov M]]
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[[Category: Yusupova G]]

Current revision

Crystal structure of haemanthamine bound to the 80S ribosome

PDB ID 5on6

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