2co5

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[[Image:2co5.gif|left|200px]]
 
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{{Structure
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==F93 FROM STIV, a winged-helix DNA-binding protein==
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|PDB= 2co5 |SIZE=350|CAPTION= <scene name='initialview01'>2co5</scene>, resolution 2.20&Aring;
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<StructureSection load='2co5' size='340' side='right'caption='[[2co5]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND=
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<table><tr><td colspan='2'>[[2co5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfolobus_turreted_icosahedral_virus_1 Sulfolobus turreted icosahedral virus 1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CO5 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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|GENE=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2co5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2co5 OCA], [https://pdbe.org/2co5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2co5 RCSB], [https://www.ebi.ac.uk/pdbsum/2co5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2co5 ProSAT]</span></td></tr>
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|DOMAIN=
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2co5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2co5 OCA], [http://www.ebi.ac.uk/pdbsum/2co5 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2co5 RCSB]</span>
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[https://www.uniprot.org/uniprot/Q6Q0J9_9VIRU Q6Q0J9_9VIRU]
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}}
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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'''F93 FROM STIV, A WINGED-HELIX DNA-BINDING PROTEIN'''
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==Overview==
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Sulfolobus turreted icosahedral virus (STIV) was the first non-tailed icosahedral virus to be isolated from an archaeal host. Like other archaeal viruses, its 37 open reading frames generally lack sequence similarity to genes with known function. The roles of the gene products in this and other archaeal viruses are thus largely unknown. However, a protein's three-dimensional structure may provide functional and evolutionary insight in cases of minimal sequence similarity. In this vein, the structure of STIV F93 reveals a homodimer with strong similarity to the winged-helix family of DNA-binding proteins. Importantly, an interchain disulfide bond is found at the dimer interface, prompting analysis of the cysteine distribution in the putative intracellular proteins of the viral proteome. The analysis suggests that intracellular disulfide bonds are common in cellular STIV proteins, where they enhance the thermostability of the viral proteome.
Sulfolobus turreted icosahedral virus (STIV) was the first non-tailed icosahedral virus to be isolated from an archaeal host. Like other archaeal viruses, its 37 open reading frames generally lack sequence similarity to genes with known function. The roles of the gene products in this and other archaeal viruses are thus largely unknown. However, a protein's three-dimensional structure may provide functional and evolutionary insight in cases of minimal sequence similarity. In this vein, the structure of STIV F93 reveals a homodimer with strong similarity to the winged-helix family of DNA-binding proteins. Importantly, an interchain disulfide bond is found at the dimer interface, prompting analysis of the cysteine distribution in the putative intracellular proteins of the viral proteome. The analysis suggests that intracellular disulfide bonds are common in cellular STIV proteins, where they enhance the thermostability of the viral proteome.
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==About this Structure==
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A winged-helix protein from Sulfolobus turreted icosahedral virus points toward stabilizing disulfide bonds in the intracellular proteins of a hyperthermophilic virus.,Larson ET, Eilers B, Menon S, Reiter D, Ortmann A, Young MJ, Lawrence CM Virology. 2007 Nov 25;368(2):249-61. Epub 2007 Jul 31. PMID:17669459<ref>PMID:17669459</ref>
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2CO5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_turreted_icosahedral_virus Sulfolobus turreted icosahedral virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CO5 OCA].
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==Reference==
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A winged-helix protein from Sulfolobus turreted icosahedral virus points toward stabilizing disulfide bonds in the intracellular proteins of a hyperthermophilic virus., Larson ET, Eilers B, Menon S, Reiter D, Ortmann A, Young MJ, Lawrence CM, Virology. 2007 Nov 25;368(2):249-61. Epub 2007 Jul 31. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17669459 17669459]
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[[Category: Single protein]]
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[[Category: Sulfolobus turreted icosahedral virus]]
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[[Category: Larson, E T.]]
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[[Category: Lawrence, C M.]]
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[[Category: Reiter, D.]]
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[[Category: archaea]]
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[[Category: archaeal virus]]
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[[Category: crenarchaea]]
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[[Category: crenarchaeal virus]]
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[[Category: disulfide bond]]
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[[Category: dna-binding]]
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[[Category: f93]]
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[[Category: hth]]
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[[Category: stiv]]
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[[Category: sulfolobus turreted icosahedral virus]]
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[[Category: sulfolobus yellowstone]]
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[[Category: thermophilic protein]]
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[[Category: thermophilic virus]]
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[[Category: viral protein]]
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[[Category: viral protein/winged helix complex]]
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[[Category: virus]]
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[[Category: whth]]
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[[Category: winged helix]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:24:16 2008''
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 2co5" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Sulfolobus turreted icosahedral virus 1]]
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[[Category: Larson ET]]
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[[Category: Lawrence CM]]
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[[Category: Reiter D]]

Current revision

F93 FROM STIV, a winged-helix DNA-binding protein

PDB ID 2co5

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