This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2cu2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:43, 13 March 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cu2.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of mannose-1-phosphate geranyltransferase from Thermus thermophilus HB8==
-
|PDB= 2cu2 |SIZE=350|CAPTION= <scene name='initialview01'>2cu2</scene>, resolution 2.20&Aring;
+
<StructureSection load='2cu2' size='340' side='right'caption='[[2cu2]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
<table><tr><td colspan='2'>[[2cu2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CU2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CU2 FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Mannose-1-phosphate_guanylyltransferase Mannose-1-phosphate guanylyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.13 2.7.7.13] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cu2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cu2 OCA], [https://pdbe.org/2cu2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cu2 RCSB], [https://www.ebi.ac.uk/pdbsum/2cu2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cu2 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cu2 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cu2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cu2 OCA], [http://www.ebi.ac.uk/pdbsum/2cu2 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2cu2 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q5SHI0_THET8 Q5SHI0_THET8]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of mannose-1-phosphate guanyltransferase from Thermus thermophilus HB8'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cu/2cu2_consurf.spt"</scriptWhenChecked>
-
2CU2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CU2 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Mannose-1-phosphate guanylyltransferase]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Thermus thermophilus]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cu2 ConSurf].
-
[[Category: Kunishima, N.]]
+
<div style="clear:both"></div>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
__TOC__
-
[[Category: Sugahara, M.]]
+
</StructureSection>
-
[[Category: mannose-1-phosphate guanyltransferase]]
+
[[Category: Large Structures]]
-
[[Category: national project on protein structural and functional analyse]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: nppsfa]]
+
[[Category: Kunishima N]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Category: Sugahara M]]
-
[[Category: rsgi]]
+
-
[[Category: structural genomic]]
+
-
[[Category: thermus thermophilus hb8]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:26:23 2008''
+

Current revision

Crystal structure of mannose-1-phosphate geranyltransferase from Thermus thermophilus HB8

PDB ID 2cu2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2cu2"
Personal tools