2cun

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:20, 25 October 2023) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cun.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of Phosphoglycerate Kinase from Pyrococcus horikoshii OT3==
-
|PDB= 2cun |SIZE=350|CAPTION= <scene name='initialview01'>2cun</scene>, resolution 2.10&Aring;
+
<StructureSection load='2cun' size='340' side='right'caption='[[2cun]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=3PG:3-PHOSPHOGLYCERIC+ACID'>3PG</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>
+
<table><tr><td colspan='2'>[[2cun]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CUN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CUN FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoglycerate_kinase Phosphoglycerate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.2.3 2.7.2.3] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
|GENE=
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3PG:3-PHOSPHOGLYCERIC+ACID'>3PG</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cun FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cun OCA], [https://pdbe.org/2cun PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cun RCSB], [https://www.ebi.ac.uk/pdbsum/2cun PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cun ProSAT], [https://www.topsan.org/Proteins/RSGI/2cun TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cun FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cun OCA], [http://www.ebi.ac.uk/pdbsum/2cun PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2cun RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/PGK_PYRHO PGK_PYRHO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cu/2cun_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cun ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of Phosphoglycerate Kinase from Pyrococcus horikoshii OT3'''
+
==See Also==
-
 
+
*[[Phosphoglycerate kinase 3D structures|Phosphoglycerate kinase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2CUN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CUN OCA].
+
[[Category: Large Structures]]
-
[[Category: Phosphoglycerate kinase]]
+
[[Category: Pyrococcus horikoshii OT3]]
-
[[Category: Pyrococcus horikoshii]]
+
[[Category: Kunishima N]]
-
[[Category: Single protein]]
+
[[Category: Mizutani H]]
-
[[Category: Kunishima, N.]]
+
-
[[Category: Mizutani, H.]]
+
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
-
[[Category: national project on protein structural and functional analyse]]
+
-
[[Category: nppsfa]]
+
-
[[Category: phosphoglycerate kinase]]
+
-
[[Category: riken structural genomics/proteomics initiative]]
+
-
[[Category: rsgi]]
+
-
[[Category: structural genomic]]
+
-
[[Category: tanpaku 3000]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:26:36 2008''
+

Current revision

Crystal structure of Phosphoglycerate Kinase from Pyrococcus horikoshii OT3

PDB ID 2cun

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2cun"
Personal tools