5z1x

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'''Unreleased structure'''
 
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The entry 5z1x is ON HOLD
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==Crystal Structure of Laccase from Cerrena sp. RSD1==
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<StructureSection load='5z1x' size='340' side='right'caption='[[5z1x]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[5z1x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cerrena Cerrena]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5Z1X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5Z1X FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.38&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5z1x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5z1x OCA], [https://pdbe.org/5z1x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5z1x RCSB], [https://www.ebi.ac.uk/pdbsum/5z1x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5z1x ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A3F2YLU5_9APHY A0A3F2YLU5_9APHY]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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A high-efficiency laccase, DLac, was isolated from Cerrena sp. RSD1. The kinetic studies indicate that DLac is a diffusion-limited enzyme. The crystal structure of DLac was determined to atomic resolution, and its overall structure shares high homology to monomeric laccases, but displays unique substrate-binding loops from those in other laccases. The substrate-binding residues with small side chain and the short substrate-binding loop IV broaden the substrate-binding cavity and may facilitate large substrate diffusion. Unlike highly glycosylated fungal laccases, the less-glycosylated DLac contains one highly conserved glycosylation site at N432 and an unique glycosylation site at N468. The N-glycans stabilize the substrate-binding loops and the protein structure, and the first N-acetylglucosamine is crucial for the catalytic efficiency. Additionally, a fivefold increase in protein yield is achieved via the submerged culture method for industrial applications. Database: The atomic coordinates of the structure of DLac from Cerrena sp. RSD1 and structural factors have been deposited in the RCSB Protein Data Bank (PDB ID: 5Z1X).
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Authors: Lee, C.C., Wu, M.H., Ho, T.H., Wang, A.H.J.
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Kinetic analysis and structural studies of a high-efficiency laccase from Cerrena sp. RSD1.,Wu MH, Lee CC, Hsiao AS, Yu SM, Wang AH, Ho TD FEBS Open Bio. 2018 Jul 3;8(8):1230-1246. doi: 10.1002/2211-5463.12459., eCollection 2018 Aug. PMID:30087829<ref>PMID:30087829</ref>
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Description: Crystal Structure of Laccase from Cerrena sp. RSD1
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Lee, C.C]]
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<div class="pdbe-citations 5z1x" style="background-color:#fffaf0;"></div>
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[[Category: Wang, A.H.J]]
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[[Category: Wu, M.H]]
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==See Also==
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[[Category: Ho, T.H]]
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*[[Laccase 3D structures|Laccase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Cerrena]]
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[[Category: Large Structures]]
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[[Category: Ho TH]]
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[[Category: Lee CC]]
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[[Category: Wang AHJ]]
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[[Category: Wu MH]]

Current revision

Crystal Structure of Laccase from Cerrena sp. RSD1

PDB ID 5z1x

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