2cx0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:49, 23 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cx0.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex)==
-
|PDB= 2cx0 |SIZE=350|CAPTION= <scene name='initialview01'>2cx0</scene>, resolution 1.80&Aring;
+
<StructureSection load='2cx0' size='340' side='right'caption='[[2cx0]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
+
<table><tr><td colspan='2'>[[2cx0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix_K1 Aeropyrum pernix K1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CX0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CX0 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
|GENE= APE0525 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=56636 Aeropyrum pernix])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cx0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cx0 OCA], [https://pdbe.org/2cx0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cx0 RCSB], [https://www.ebi.ac.uk/pdbsum/2cx0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cx0 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cx0 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=[[2cx1|2CX1]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cx0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cx0 OCA], [http://www.ebi.ac.uk/pdbsum/2cx0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2cx0 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q9YEQ6_AERPE Q9YEQ6_AERPE]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex)'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cx/2cx0_consurf.spt"</scriptWhenChecked>
-
2CX0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CX0 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Aeropyrum pernix]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Mizohata, E.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cx0 ConSurf].
-
[[Category: Morita, S.]]
+
<div style="clear:both"></div>
-
[[Category: Nagano, K.]]
+
__TOC__
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
</StructureSection>
-
[[Category: Shirouzu, M.]]
+
[[Category: Aeropyrum pernix K1]]
-
[[Category: Terada, T.]]
+
[[Category: Large Structures]]
-
[[Category: Uda, H.]]
+
[[Category: Mizohata E]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Morita S]]
-
[[Category: national project on protein structural and functional analyse]]
+
[[Category: Nagano K]]
-
[[Category: nppsfa]]
+
[[Category: Shirouzu M]]
-
[[Category: pua domain]]
+
[[Category: Terada T]]
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Category: Uda H]]
-
[[Category: rsgi]]
+
[[Category: Yokoyama S]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:27:29 2008''
+

Current revision

Crystal structure of a PUA domain (APE0525) from the Aeropyrum pernix K1 (sulfate complex)

PDB ID 2cx0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2cx0"
Personal tools