1g8p

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:24, 7 February 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==CRYSTAL STRUCTURE OF BCHI SUBUNIT OF MAGNESIUM CHELATASE==
==CRYSTAL STRUCTURE OF BCHI SUBUNIT OF MAGNESIUM CHELATASE==
-
<StructureSection load='1g8p' size='340' side='right' caption='[[1g8p]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+
<StructureSection load='1g8p' size='340' side='right'caption='[[1g8p]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1g8p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"rhodonostoc_capsulatum"_molisch_1907 "rhodonostoc capsulatum" molisch 1907]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G8P OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1G8P FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1g8p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodobacter_capsulatus Rhodobacter capsulatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G8P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G8P FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BCHI_RHOCA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1061 "Rhodonostoc capsulatum" Molisch 1907])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1g8p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g8p OCA], [http://pdbe.org/1g8p PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1g8p RCSB], [http://www.ebi.ac.uk/pdbsum/1g8p PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1g8p ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g8p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g8p OCA], [https://pdbe.org/1g8p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g8p RCSB], [https://www.ebi.ac.uk/pdbsum/1g8p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g8p ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/BCHI_RHOCB BCHI_RHOCB]] Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
+
[https://www.uniprot.org/uniprot/BCHI_RHOCB BCHI_RHOCB] Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 19: Line 19:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g8p ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g8p ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
In chlorophyll biosynthesis, insertion of Mg(2+) into protoporphyrin IX is catalysed in an ATP-dependent reaction by a three-subunit (BchI, BchD and BchH) enzyme magnesium chelatase. In this work we present the three-dimensional structure of the ATP-binding subunit BchI. The structure has been solved by the multiple wavelength anomalous dispersion method and refined at 2.1 A resolution to the crystallographic R-factor of 22.2 % (R(free)=24.5 %). It belongs to the chaperone-like "ATPase associated with a variety of cellular activities" (AAA) family of ATPases, with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide-binding site, while in other known AAA module structures it is located on the top. Examination by electron microscopy of BchI solutions in the presence of ATP demonstrated that BchI, like other AAA proteins, forms oligomeric ring structures. Analysis of the amino acid sequence of subunit BchD revealed an AAA module at the N-terminal portion of the sequence and an integrin I domain at the C terminus. An acidic, proline-rich region linking these two domains is suggested to contribute to the association of BchI and BchD by binding to a positively charged cleft at the surface of the nucleotide-binding domain of BchI. Analysis of the amino acid sequences of BchI and BchH revealed integrin I domain-binding sequence motifs. These are proposed to bind the integrin I domain of BchD during the functional cycle of magnesium chelatase, linking porphyrin metallation by BchH to ATP hydrolysis by BchI. An integrin I domain and an acidic and proline-rich region have been identified in subunit CobT of cobalt chelatase, clearly demonstrating its homology to BchD. These findings, for the first time, provide an insight into the subunit organisation of magnesium chelatase and the homologous colbalt chelatase.
 
- 
-
Interplay between an AAA module and an integrin I domain may regulate the function of magnesium chelatase.,Fodje MN, Hansson A, Hansson M, Olsen JG, Gough S, Willows RD, Al-Karadaghi S J Mol Biol. 2001 Aug 3;311(1):111-22. PMID:11469861<ref>PMID:11469861</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 1g8p" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Rhodonostoc capsulatum molisch 1907]]
+
[[Category: Large Structures]]
-
[[Category: Al-Karadaghi, S]]
+
[[Category: Rhodobacter capsulatus]]
-
[[Category: Fodje, M N]]
+
[[Category: Al-Karadaghi S]]
-
[[Category: Gough, S]]
+
[[Category: Fodje MN]]
-
[[Category: Hansson, A]]
+
[[Category: Gough S]]
-
[[Category: Hansson, M]]
+
[[Category: Hansson A]]
-
[[Category: Olsen, J G]]
+
[[Category: Hansson M]]
-
[[Category: Willows, R D]]
+
[[Category: Olsen JG]]
-
[[Category: Aaa+]]
+
[[Category: Willows RD]]
-
[[Category: Metal transport]]
+
-
[[Category: P-loop]]
+
-
[[Category: Parallel beta sheet]]
+
-
[[Category: Photosynthesis]]
+
-
[[Category: Rossmann fold]]
+

Current revision

CRYSTAL STRUCTURE OF BCHI SUBUNIT OF MAGNESIUM CHELATASE

PDB ID 1g8p

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools