6fek
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6fek is ON HOLD Authors: McDonald, N.Q., Kohno, T. Description: Oncogenic point mutation of RET receptor tyrosine kinase [[Category: Unreleased Str...) |
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- | '''Unreleased structure''' | ||
- | + | ==Oncogenic point mutation of RET receptor tyrosine kinase== | |
+ | <StructureSection load='6fek' size='340' side='right'caption='[[6fek]], [[Resolution|resolution]] 2.30Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6fek]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FEK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FEK FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADN:ADENOSINE'>ADN</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=PTR:O-PHOSPHOTYROSINE'>PTR</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6fek FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fek OCA], [https://pdbe.org/6fek PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6fek RCSB], [https://www.ebi.ac.uk/pdbsum/6fek PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6fek ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Resistance to vandetanib, a type I RET kinase inhibitor, developed in a patient with metastatic lung adenocarcinoma harboring a CCDC6-RET fusion that initially exhibited a response to treatment. The resistant tumor acquired a secondary mutation resulting in a serine-to-phenylalanine substitution at codon 904 in the activation loop of the RET kinase domain. The S904F mutation confers resistance to vandetanib by increasing the ATP affinity and autophosphorylation activity of RET kinase. A reduced interaction with the drug is also observed in vitro for the S904F mutant by thermal shift assay. A crystal structure of the S904F mutant reveals a small hydrophobic core around F904 likely to enhance basal kinase activity by stabilizing an active conformer. Our findings indicate that missense mutations in the activation loop of the kinase domain are able to increase kinase activity and confer drug resistance through allosteric effects. | ||
- | + | A secondary RET mutation in the activation loop conferring resistance to vandetanib.,Nakaoku T, Kohno T, Araki M, Niho S, Chauhan R, Knowles PP, Tsuchihara K, Matsumoto S, Shimada Y, Mimaki S, Ishii G, Ichikawa H, Nagatoishi S, Tsumoto K, Okuno Y, Yoh K, McDonald NQ, Goto K Nat Commun. 2018 Feb 12;9(1):625. doi: 10.1038/s41467-018-02994-7. PMID:29434222<ref>PMID:29434222</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Kohno | + | <div class="pdbe-citations 6fek" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | |
+ | ==See Also== | ||
+ | *[[Cadherin 3D structures|Cadherin 3D structures]] | ||
+ | *[[Tyrosine kinase receptor 3D structures|Tyrosine kinase receptor 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Homo sapiens]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Kohno T]] | ||
+ | [[Category: McDonald NQ]] |
Current revision
Oncogenic point mutation of RET receptor tyrosine kinase
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