6ff7

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'''Unreleased structure'''
 
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The entry 6ff7 is ON HOLD
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==human Bact spliceosome core structure==
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<SX load='6ff7' size='340' side='right' viewer='molstar' caption='[[6ff7]], [[Resolution|resolution]] 4.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6ff7]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FF7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6FF7 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=IHP:INOSITOL+HEXAKISPHOSPHATE'>IHP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ff7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ff7 OCA], [https://pdbe.org/6ff7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ff7 RCSB], [https://www.ebi.ac.uk/pdbsum/6ff7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ff7 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RBMX2_HUMAN RBMX2_HUMAN]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The spliceosome is a highly dynamic macromolecular complex that precisely excises introns from pre-mRNA. Here we report the cryo-EM 3D structure of the human B(act) spliceosome at 3.4 A resolution. In the B(act) state, the spliceosome is activated but not catalytically primed, so that it is functionally blocked prior to the first catalytic step of splicing. The spliceosomal core is similar to the yeast B(act) spliceosome; important differences include the presence of the RNA helicase aquarius and peptidyl prolyl isomerases. To examine the overall dynamic behavior of the purified spliceosome, we developed a principal component analysis-based approach. Calculating the energy landscape revealed eight major conformational states, which we refined to higher resolution. Conformational differences of the highly flexible structural components between these eight states reveal how spliceosomal components contribute to the assembly of the spliceosome, allowing it to generate a dynamic interaction network required for its subsequent catalytic activation.
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Authors: Haselbach, D., Komarov, I., Agafonov, D., Hartmuth, K., Graf, B., Kastner, B., Luehrmann, R., Stark, H.
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Structure and Conformational Dynamics of the Human Spliceosomal B(act) Complex.,Haselbach D, Komarov I, Agafonov DE, Hartmuth K, Graf B, Dybkov O, Urlaub H, Kastner B, Luhrmann R, Stark H Cell. 2018 Jan 25;172(3):454-464.e11. doi: 10.1016/j.cell.2018.01.010. Epub 2018 , Jan 17. PMID:29361316<ref>PMID:29361316</ref>
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Description: human Bact spliceosome core structure
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Agafonov, D]]
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<div class="pdbe-citations 6ff7" style="background-color:#fffaf0;"></div>
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[[Category: Komarov, I]]
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[[Category: Kastner, B]]
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==See Also==
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[[Category: Luehrmann, R]]
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*[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]]
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[[Category: Stark, H]]
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*[[Pre-mRNA splicing factors 3D structures|Pre-mRNA splicing factors 3D structures]]
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[[Category: Haselbach, D]]
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== References ==
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[[Category: Graf, B]]
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<references/>
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[[Category: Hartmuth, K]]
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__TOC__
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</SX>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Agafonov D]]
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[[Category: Graf B]]
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[[Category: Hartmuth K]]
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[[Category: Haselbach D]]
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[[Category: Kastner B]]
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[[Category: Komarov I]]
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[[Category: Luehrmann R]]
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[[Category: Stark H]]

Current revision

human Bact spliceosome core structure

6ff7, resolution 4.50Å

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