6byt
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==Complex structure of LOR107 mutant (R320) with tetrasaccharide substrate== | |
| - | + | <StructureSection load='6byt' size='340' side='right'caption='[[6byt]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[6byt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Alteromonas_sp._LOR Alteromonas sp. LOR]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6BYT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6BYT FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=83Y:6-DEOXY-3-O-SULFO-ALPHA-L-MANNOPYRANOSE'>83Y</scene>, <scene name='pdbligand=BDP:BETA-D-GLUCOPYRANURONIC+ACID'>BDP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GCD:4,5-DEHYDRO-D-GLUCURONIC+ACID'>GCD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | [[Category: Cygler | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6byt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6byt OCA], [https://pdbe.org/6byt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6byt RCSB], [https://www.ebi.ac.uk/pdbsum/6byt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6byt ProSAT]</span></td></tr> |
| - | [[Category: Ulaganathan | + | </table> |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/UL24S_ALTSL UL24S_ALTSL] Ulvan lyase involved in ulvan degradation. Ulvan is the main polysaccharide component of the Ulvales (green seaweed) cell wall. It is composed of disaccharide building blocks comprising 3-sulfated rhamnose (Rha3S) linked to D-glucuronic acid (GlcA), L-iduronic acid (IduA), or D-xylose (Xyl). Ulvan lyase catalyzes preferentially the endolytic cleavage of the glycosidic bond between Rha3S and the uronic acid GlcA, but not IduA, producing oligosaccharides that have unsaturated 4-deoxy-L-threo-hex-4-enopyranosiduronic acid (deltaUA) at the non-reducing end. The most abundant end products in the degradation of the ulvan polysaccharide were deltaUA-Rha3S disaccharides and deltaUA-Rha3S-IduA-Rha3S and deltaUA-Rha3S-Xyl-Rha3S tetrasaccharides.<ref>PMID:26763234</ref> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Alteromonas sp. LOR]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Cygler M]] | ||
| + | [[Category: Ulaganathan TS]] | ||
Current revision
Complex structure of LOR107 mutant (R320) with tetrasaccharide substrate
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