3exa
From Proteopedia
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==Crystal structure of the full-length tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.== | ==Crystal structure of the full-length tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.== | ||
| - | <StructureSection load='3exa' size='340' side='right' caption='[[3exa]], [[Resolution|resolution]] 2.30Å' scene=''> | + | <StructureSection load='3exa' size='340' side='right'caption='[[3exa]], [[Resolution|resolution]] 2.30Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3exa]] is a 4 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[3exa]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans Alkalihalobacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EXA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EXA FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | <tr id=' | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3exa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3exa OCA], [https://pdbe.org/3exa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3exa RCSB], [https://www.ebi.ac.uk/pdbsum/3exa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3exa ProSAT], [https://www.topsan.org/Proteins/NESGC/3exa TOPSAN]</span></td></tr> |
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| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/MIAA_HALH5 MIAA_HALH5] Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ex/3exa_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ex/3exa_consurf.spt"</scriptWhenChecked> | ||
| - | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Alkalihalobacillus halodurans]] |
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Abashidze | + | [[Category: Abashidze M]] |
| - | [[Category: Acton | + | [[Category: Acton TB]] |
| - | [[Category: Baran | + | [[Category: Baran MC]] |
| - | [[Category: Cunningham | + | [[Category: Cunningham K]] |
| - | [[Category: Forouhar | + | [[Category: Forouhar F]] |
| - | [[Category: Hunt | + | [[Category: Hunt JF]] |
| - | [[Category: Janjua | + | [[Category: Janjua H]] |
| - | [[Category: Liu | + | [[Category: Liu J]] |
| - | [[Category: Ma | + | [[Category: Ma L-C]] |
| - | [[Category: Montelione | + | [[Category: Montelione GT]] |
| - | + | [[Category: Neely H]] | |
| - | [[Category: Neely | + | [[Category: Rost B]] |
| - | [[Category: Rost | + | [[Category: Seetharaman J]] |
| - | [[Category: Seetharaman | + | [[Category: Shastry R]] |
| - | [[Category: Shastry | + | [[Category: Tong L]] |
| - | [[Category: Tong | + | [[Category: Xiao R]] |
| - | [[Category: Xiao | + | |
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Current revision
Crystal structure of the full-length tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.
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Categories: Alkalihalobacillus halodurans | Large Structures | Abashidze M | Acton TB | Baran MC | Cunningham K | Forouhar F | Hunt JF | Janjua H | Liu J | Ma L-C | Montelione GT | Neely H | Rost B | Seetharaman J | Shastry R | Tong L | Xiao R
