3iti

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:54, 17 October 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Structure of bovine trypsin with the MAD triangle B3C==
==Structure of bovine trypsin with the MAD triangle B3C==
-
<StructureSection load='3iti' size='340' side='right' caption='[[3iti]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
+
<StructureSection load='3iti' size='340' side='right'caption='[[3iti]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[3iti]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ITI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ITI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[3iti]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ITI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ITI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=BRV:5-AMINO-2,4,6-TRIBROMOBENZENE-1,3-DICARBOXYLIC+ACID'>BRV</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3e3d|3e3d]], [[3e3s|3e3s]], [[3e3t|3e3t]], [[3gt3|3gt3]], [[3gt4|3gt4]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=BRV:5-AMINO-2,4,6-TRIBROMOBENZENE-1,3-DICARBOXYLIC+ACID'>BRV</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iti OCA], [https://pdbe.org/3iti PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iti RCSB], [https://www.ebi.ac.uk/pdbsum/3iti PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iti ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iti OCA], [http://pdbe.org/3iti PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iti RCSB], [http://www.ebi.ac.uk/pdbsum/3iti PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3iti ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/it/3iti_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/it/3iti_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 28: Line 29:
</div>
</div>
<div class="pdbe-citations 3iti" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3iti" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Trypsin 3D structures|Trypsin 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 33: Line 37:
</StructureSection>
</StructureSection>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Trypsin]]
+
[[Category: Large Structures]]
-
[[Category: Beck, T]]
+
[[Category: Beck T]]
-
[[Category: Cunha, C E.da]]
+
[[Category: Sheldrick GM]]
-
[[Category: Sheldrick, G M]]
+
[[Category: Da Cunha CE]]
-
[[Category: 5-amino-2]]
+
-
[[Category: 6-tribromoisophthalic acid]]
+
-
[[Category: B3c]]
+
-
[[Category: Digestion]]
+
-
[[Category: Disulfide bond]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: I3c]]
+
-
[[Category: Mad triangle]]
+
-
[[Category: Magic triangle]]
+
-
[[Category: Metal-binding]]
+
-
[[Category: Phasing tool]]
+
-
[[Category: Protease]]
+
-
[[Category: Secreted]]
+
-
[[Category: Serine protease]]
+
-
[[Category: Zymogen]]
+

Current revision

Structure of bovine trypsin with the MAD triangle B3C

PDB ID 3iti

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3iti"
Personal tools