4rs3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:51, 17 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Crystal structure of carbohydrate transporter A0QYB3 from Mycobacterium smegmatis str. MC2 155, target EFI-510969, in complex with xylitol==
==Crystal structure of carbohydrate transporter A0QYB3 from Mycobacterium smegmatis str. MC2 155, target EFI-510969, in complex with xylitol==
-
<StructureSection load='4rs3' size='340' side='right' caption='[[4rs3]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
+
<StructureSection load='4rs3' size='340' side='right'caption='[[4rs3]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4rs3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mycs2 Mycs2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RS3 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4RS3 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4rs3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis_MC2_155 Mycolicibacterium smegmatis MC2 155]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4RS3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4RS3 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=XYL:D-XYLITOL'>XYL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=XYL:D-XYLITOL'>XYL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">MSMEG_3598, MSMEI_3515 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=246196 MYCS2])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4rs3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rs3 OCA], [https://pdbe.org/4rs3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4rs3 RCSB], [https://www.ebi.ac.uk/pdbsum/4rs3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4rs3 ProSAT]</span></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Monosaccharide-transporting_ATPase Monosaccharide-transporting ATPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.3.17 3.6.3.17] </span></td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4rs3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4rs3 OCA], [http://pdbe.org/4rs3 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4rs3 RCSB], [http://www.ebi.ac.uk/pdbsum/4rs3 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4rs3 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/XYPA_MYCS2 XYPA_MYCS2] Part of an ABC transporter complex likely involved in xylitol import. Binds xylitol.<ref>PMID:26560079</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Monosaccharide-transporting ATPase]]
+
[[Category: Large Structures]]
-
[[Category: Mycs2]]
+
[[Category: Mycolicibacterium smegmatis MC2 155]]
-
[[Category: Almo, S C]]
+
[[Category: Al Obaidi N]]
-
[[Category: Attonito, J D]]
+
[[Category: Almo SC]]
-
[[Category: Bhosle, R]]
+
[[Category: Attonito JD]]
-
[[Category: Chamala, S]]
+
[[Category: Bhosle R]]
-
[[Category: Chowdhury, S]]
+
[[Category: Chamala S]]
-
[[Category: EFI, Enzyme Function Initiative]]
+
[[Category: Chowdhury S]]
-
[[Category: Gerlt, J A]]
+
[[Category: Gerlt JA]]
-
[[Category: Glenn, A Scott]]
+
[[Category: Hillerich B]]
-
[[Category: Hillerich, B]]
+
[[Category: Lafleur J]]
-
[[Category: Lafleur, J]]
+
[[Category: Love J]]
-
[[Category: Love, J]]
+
[[Category: Morisco LL]]
-
[[Category: Morisco, L L]]
+
[[Category: Patskovsky Y]]
-
[[Category: Obaidi, N Al]]
+
[[Category: Scott Glenn A]]
-
[[Category: Patskovsky, Y]]
+
[[Category: Siedel RD]]
-
[[Category: Siedel, R D]]
+
[[Category: Toro R]]
-
[[Category: Toro, R]]
+
[[Category: Wasserman SR]]
-
[[Category: Wasserman, S R]]
+
[[Category: Whalen KL]]
-
[[Category: Whalen, K L]]
+
-
[[Category: Abc-type]]
+
-
[[Category: Efi]]
+
-
[[Category: Enzyme function initiative]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Sugar transporter]]
+
-
[[Category: Transport protein]]
+

Current revision

Crystal structure of carbohydrate transporter A0QYB3 from Mycobacterium smegmatis str. MC2 155, target EFI-510969, in complex with xylitol

PDB ID 4rs3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/4rs3"
Personal tools