This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1l3i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:09, 16 August 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==MT0146, THE PRECORRIN-6Y METHYLTRANSFERASE (CBIT) HOMOLOG FROM M. THERMOAUTOTROPHICUM, ADOHCY BINARY COMPLEX==
==MT0146, THE PRECORRIN-6Y METHYLTRANSFERASE (CBIT) HOMOLOG FROM M. THERMOAUTOTROPHICUM, ADOHCY BINARY COMPLEX==
-
<StructureSection load='1l3i' size='340' side='right' caption='[[1l3i]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
+
<StructureSection load='1l3i' size='340' side='right'caption='[[1l3i]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1l3i]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/"methanobacterium_thermoautotrophicus"_(sic)_zeikus_and_wolfe_1972 "methanobacterium thermoautotrophicus" (sic) zeikus and wolfe 1972]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L3I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1L3I FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1l3i]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L3I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1L3I FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1l3b|1l3b]], [[1l3c|1l3c]], [[1kxz|1kxz]], [[1f38|1f38]]</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l3i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l3i OCA], [https://pdbe.org/1l3i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l3i RCSB], [https://www.ebi.ac.uk/pdbsum/1l3i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l3i ProSAT]</span></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Mth146 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=145262 "Methanobacterium thermoautotrophicus" (sic) Zeikus and Wolfe 1972])</td></tr>
+
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1l3i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l3i OCA], [http://pdbe.org/1l3i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1l3i RCSB], [http://www.ebi.ac.uk/pdbsum/1l3i PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1l3i ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CBIT_METTH CBIT_METTH]] Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin-7 (Probable).<ref>PMID:12429089</ref>
+
[https://www.uniprot.org/uniprot/CBIT_METTH CBIT_METTH] Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin-7 (Probable).<ref>PMID:12429089</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 35: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Benach, J]]
+
[[Category: Large Structures]]
-
[[Category: Christendat, D]]
+
[[Category: Methanothermobacter thermautotrophicus]]
-
[[Category: Hunt, J F]]
+
[[Category: Benach J]]
-
[[Category: Keller, J P]]
+
[[Category: Christendat D]]
-
[[Category: Smith, P M]]
+
[[Category: Hunt JF]]
-
[[Category: DeTitta, G]]
+
[[Category: Keller JP]]
-
[[Category: Beta barrel]]
+
[[Category: Smith PM]]
-
[[Category: Decarboxylase]]
+
[[Category: DeTitta G]]
-
[[Category: Lyase]]
+
-
[[Category: Methyltransferase]]
+
-
[[Category: Rossmann fold]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structure-based function assignment]]
+
-
[[Category: Tetramer]]
+
-
[[Category: Transferase]]
+

Current revision

MT0146, THE PRECORRIN-6Y METHYLTRANSFERASE (CBIT) HOMOLOG FROM M. THERMOAUTOTROPHICUM, ADOHCY BINARY COMPLEX

PDB ID 1l3i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1l3i"
Personal tools