6fl5
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6fl5 is ON HOLD until Paper Publication Authors: Giardina, G., Cutruzzola, F., Lucchi, R. Description: Structure of human SHMT1-H135N-R137A-E168N m...) |
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- | '''Unreleased structure''' | ||
- | + | ==Structure of human SHMT1-H135N-R137A-E168N mutant at 3.6 Ang. resolution== | |
+ | <StructureSection load='6fl5' size='340' side='right' caption='[[6fl5]], [[Resolution|resolution]] 3.60Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6fl5]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6FL5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6FL5 FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycine_hydroxymethyltransferase Glycine hydroxymethyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.2.1 2.1.2.1] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6fl5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6fl5 OCA], [http://pdbe.org/6fl5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6fl5 RCSB], [http://www.ebi.ac.uk/pdbsum/6fl5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6fl5 ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/GLYC_HUMAN GLYC_HUMAN]] Interconversion of serine and glycine. | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Cancer cells reprogramme one-carbon metabolism (OCM) to sustain growth and proliferation. Depending on cell demands, serine hydroxymethyltransferase (SHMT) dynamically changes the fluxes of OCM by reversibly converting serine and tetrahydrofolate (THF) into 5,10-methylene-THF and glycine. SHMT is a tetrameric enzyme that mainly exists in three isoforms; two localize in the cytosol (SHMT1/SHMT2alpha) and one (SHMT2) in the mitochondria. Both the cytosolic isoforms can also translocate to the nucleus to sustain de novo thymidylate synthesis and support cell proliferation. Finally, the expression levels of the different isoforms are regulated to a certain extent by a yet unknown crosstalk mechanism. We have designed and fully characterized a set of three SHMT1 mutants, which uncouple the oligomeric state of the enzyme from its catalytic activity. We have then investigated the effects of the mutations on SHMT1 nuclear localization, cell viability and crosstalk in lung cancer cells (A549; H1299). Our data reveal that in these cell lines de novo thymidylate synthesis requires SHMT1 to be active, regardless of its oligomeric state. We have also confirmed that the crosstalk between the cytosolic and mitochondrial SHMT actually takes place and regulates the expression of the two isoforms. Apparently, the crosstalk mechanism is independent from the oligomeric state and the catalytic activity of SHMT1. DATABASE: Structural data are available in the PDB under the accession number 6FL5. | ||
- | + | The catalytic activity of serine hydroxymethyltransferase is essential for de novo nuclear dTMP synthesis in lung cancer cells.,Giardina G, Paone A, Tramonti A, Lucchi R, Marani M, Magnifico MC, Bouzidi A, Pontecorvi V, Guiducci G, Zamparelli C, Rinaldo S, Paiardini A, Contestabile R, Cutruzzola F FEBS J. 2018 Sep;285(17):3238-3253. doi: 10.1111/febs.14610. Epub 2018 Aug 7. PMID:30035852<ref>PMID:30035852</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 6fl5" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Glycine hydroxymethyltransferase]] | ||
[[Category: Cutruzzola, F]] | [[Category: Cutruzzola, F]] | ||
- | [[Category: Lucchi, R]] | ||
[[Category: Giardina, G]] | [[Category: Giardina, G]] | ||
+ | [[Category: Lucchi, R]] | ||
+ | [[Category: Glicine]] | ||
+ | [[Category: Interface]] | ||
+ | [[Category: Ocm]] | ||
+ | [[Category: Serine]] | ||
+ | [[Category: Serine hydroxymethyltransferase]] | ||
+ | [[Category: Tca]] | ||
+ | [[Category: Tetramer]] | ||
+ | [[Category: Thf]] | ||
+ | [[Category: Transferase]] |
Current revision
Structure of human SHMT1-H135N-R137A-E168N mutant at 3.6 Ang. resolution
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