1oxf
From Proteopedia
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==Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins== | ==Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins== | ||
- | <StructureSection load='1oxf' size='340' side='right' caption='[[1oxf]], [[Resolution|resolution]] 1.69Å' scene=''> | + | <StructureSection load='1oxf' size='340' side='right'caption='[[1oxf]], [[Resolution|resolution]] 1.69Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1oxf]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1oxf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cfp_marker_plasmid_pWM1009 Cfp marker plasmid pWM1009]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OXF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OXF FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.69Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4IN:4-AMINO-L-TRYPTOPHAN'>4IN</scene>, <scene name='pdbligand=5ZA:(5Z)-2-[(1S,2R)-1-AMINO-2-HYDROXYPROPYL]-5-[(4-AMINO-1H-INDOL-3-YL)METHYLENE]-3-(2-HYDROXYETHYL)-3,5-DIHYDRO-4H-IMIDAZOL-4-ONE'>5ZA</scene></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1oxf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oxf OCA], [https://pdbe.org/1oxf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1oxf RCSB], [https://www.ebi.ac.uk/pdbsum/1oxf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1oxf ProSAT]</span></td></tr> |
</table> | </table> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ox/1oxf_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ox/1oxf_consurf.spt"</scriptWhenChecked> | ||
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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</div> | </div> | ||
<div class="pdbe-citations 1oxf" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 1oxf" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Cfp marker plasmid | + | [[Category: Cfp marker plasmid pWM1009]] |
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Azim MK]] |
- | [[Category: Budisa | + | [[Category: Budisa N]] |
- | [[Category: Holak | + | [[Category: Holak TA]] |
- | [[Category: Huber | + | [[Category: Huber R]] |
- | [[Category: Jung | + | [[Category: Hyun Bae J]] |
- | [[Category: Kim | + | [[Category: Jung G]] |
- | [[Category: Moroder | + | [[Category: Kim JS]] |
- | [[Category: Rubini | + | [[Category: Moroder L]] |
- | [[Category: Seifert | + | [[Category: Rubini M]] |
- | [[Category: Wiegand | + | [[Category: Seifert MH]] |
- | [[Category: Zumbusch | + | [[Category: Wiegand G]] |
- | + | [[Category: Zumbusch A]] | |
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Current revision
Expansion of the Genetic Code Enables Design of a Novel "Gold" Class of Green Fluorescent Proteins
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Categories: Cfp marker plasmid pWM1009 | Large Structures | Azim MK | Budisa N | Holak TA | Huber R | Hyun Bae J | Jung G | Kim JS | Moroder L | Rubini M | Seifert MH | Wiegand G | Zumbusch A